Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118937782 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 93081665 ~ 93084620 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| 5-hydroxytryptamine receptor 3A-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005035203.1 | True | 418 | mRNA | 0.50 | 3 | 93081665 | 93084620 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118937781 | LOC106606397 | coding | downstream | 7362 | 93066680 ~ 93074303 (-) |
| LOC110487425 | LOC106606392 | coding | downstream | 63659 | 93016163 ~ 93018006 (-) |
| LOC110487082 | otop2 | coding | downstream | 89584 | 92961669 ~ 92992081 (-) |
| LOC118937833 | otop2 | coding | downstream | 128947 | 92948575 ~ 92952718 (-) |
| LOC110487086 | LOC106601910 | coding | downstream | 204485 | 92873659 ~ 92877180 (-) |
| LOC110487468 | LOC106602060 | coding | upstream | 22629 | 93107249 ~ 93140129 (-) |
| LOC110485276 | LOC106606397 | coding | upstream | 65848 | 93150468 ~ 93152962 (-) |
| LOC110487466 | NA | coding | upstream | 78391 | 93163011 ~ 93165988 (-) |
| LOC110487450 | LOC106602060 | coding | upstream | 87401 | 93172021 ~ 93186655 (-) |
| LOC110518132 | mkk6a | coding | upstream | 201833 | 93286453 ~ 93311362 (-) |
| G1128004 | NA | non-coding | downstream | 45607 | 93035851 ~ 93036058 (-) |
| G1128002 | NA | non-coding | downstream | 48471 | 93032020 ~ 93033194 (-) |
| G1128000 | LOC106602066 | non-coding | downstream | 51945 | 93029127 ~ 93029720 (-) |
| G1127999 | NA | non-coding | downstream | 52674 | 93026856 ~ 93028991 (-) |
| G1127995 | NA | non-coding | downstream | 63337 | 93018114 ~ 93018328 (-) |
| G1128022 | NA | non-coding | upstream | 3605 | 93088225 ~ 93169782 (-) |
| G1128030 | LOC106602060 | non-coding | upstream | 29886 | 93114506 ~ 93114959 (-) |
| G1128032 | NA | non-coding | upstream | 30514 | 93115134 ~ 93162598 (-) |
| G1128039 | NA | non-coding | upstream | 45149 | 93129769 ~ 93175028 (-) |
| G1128069 | NA | non-coding | upstream | 140505 | 93225125 ~ 93225345 (-) |
| G1127792 | NA | other | downstream | 227557 | 92850300 ~ 92854108 (-) |
| G1127739 | NA | other | downstream | 326533 | 92754879 ~ 92755132 (-) |
| G1127735 | NA | other | downstream | 333450 | 92747794 ~ 92748215 (-) |
| G1127726 | NA | other | downstream | 363198 | 92715049 ~ 92718467 (-) |
| LOC110516409 | LOC106594801 | other | downstream | 446941 | 92598880 ~ 92802145 (-) |
| LOC110487457 | LOC106606216 | other | upstream | 305482 | 93381051 ~ 93392268 (-) |
| G1128567 | LOC106606382 | other | upstream | 489445 | 93574065 ~ 93577988 (-) |
| G1128609 | NA | other | upstream | 605065 | 93689685 ~ 93690320 (-) |
| G1128616 | NA | other | upstream | 618375 | 93702995 ~ 93707636 (-) |
| p-ras | LOC101485266 | other | upstream | 630578 | 93715163 ~ 93725341 (-) |
