LOC118937787 (LOC106606413)


Basic Information

Item Value
gene id LOC118937787
gene name LOC106606413
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 93497315 ~ 93501466 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036939262.1
ATAACTGAGCAATCTGACAGATAACGTGTCACTGTGATTGGTCCAAAGTTCAATGTCGACCGGCACCAAGAGACAGGGACACACTCAGACAGACTGAAccagtggagagagaagagacaaggAAGTCCAGAGGAAAAGAGAAACACATGAAATCCTCTGGAAGGAGGCAGGACTGAAGGAAACCGGTACAGCCCAGATACACACAGCTCTTGGTTCTGAGAGAGATGGACATCCTTGAAACAGCCGCCTATGACCGAAGACAGCGCAGGAACACGtactgtgttctactactctctctctcgccgttCTTCCTGGCCATCGCTGTCTACTTCTATCTGTGGATCCCtgactcctccccctccatcttcgCTGCGGCTATTAAGGCCGCCCCTGTCATCTCATTGGCTCTCCTGGTGCTGAGCTACAAAGGGGGGAGGAGTCTCCTCGGCGTGGCGGGGGGCCTGATCTTCTCGGCAGGCGGAGACTGTTGCCTTATATGGCCCGAGCTGTTTCTCCATGGAATGGCCTCCTTCGCCTTGGCCCACCTGCTCTActccctcaccttcctctccACTCGTTACTCCTCCCCCagctcctcctcttccctgtccTACTTCTTCTGCCTGCTCCTGTGGCTGCTGGGGGGAGGCCTCTACGCTTACCTCTTCCCTTTCCTGCAGAAGACACCGGACGCGGCCGCCCTGACTCCCAGGGTCGGGGTGTACGTGGCTCTGATCGTCCTGATGGCTACGCTGGCGGTTCGCACCCGCCGACCGCTGATCATGCTGGGCAGTTTGATCTTCATGACCTCTGACCTGACGCTGGCGCTGCAGACCTTCAAAGTGACGGAGCCCCTGGAGCACGGCAGGCACATCGTCATGACGACGTACTACCTGGCGCAGCTGCTGATCGCCGTGGGTGACATCAAGGCCGCGGAGGGCGGGGATGAGTTTGCCAAATGGAAGAAATCTTAGTTAAGGGGTCATGTGAGATAGGGGCCAGGTCCCAATTTTCCACCCTGCTCCCGAAGTGTACAAACAACTGTCCCCTTTCTCACATGGACTTTACAATGGTGGAAACTCCCTCCAGCCTACTTATACTAATCTCACGCTTTTAAATCAATGACAGGGAGTGGTTAAGTGCACAATTCTGGAAAAGGGTGGAGAATCAGGACGTTGCCATGGAAAGCAAACTTGGGACTACCATTCTCTGACTAGTCGGCAGCTATAGGAACTTCAGGCTGTTTGTTGAGACTAGACTGAGAATGAGGCAGAAAGAAGTTGAAAAAGGAAGATTCCCCCCAAAGAAAATCCTCTTTATTAAACTAAACCTCAGAGTATCAGGACAGTCTGTCCGTTTGTTGAGAAAGCTCAGGAATGGGAAACATAACCACTGCCAAAATTCAGACAGctagatgcaaggactgacatGAGACGGACTTGACAGTATTTTCCATAGTCCAGAATAAAGTTAGAAATATCATTCTCCTTCACTCTGTCTGTGAAAACAGTCCTACGGTCTTAAAGACATGATTTGAGATGTGATGCACTTCCCTTGTTAGTTGTGATTTATCAAACACATTCTGTATAACGGTCTGTTGATATGAAGAGACGATTCTCAGAAATGAAGTCCCTTatgaaaaaataaaatgttaatttATTCATGATGAAATGGGGATGAAAAATAAAGGTGTGTTACATA

Function

NR:

description
PREDICTED: lysoplasmalogenase-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036939262.1 True 1701 mRNA 0.50 3 93497315 93501466

Neighbor

gene id symbol gene type direction distance location
LOC110487430 LOC106601877 coding downstream 8783 93473123 ~ 93488532 (-)
LOC110487457 LOC106606216 coding downstream 105047 93381051 ~ 93392268 (-)
LOC110487442 trub1 coding downstream 130455 93365401 ~ 93366860 (-)
LOC110485279 LOC106601935 coding downstream 178709 93312913 ~ 93318606 (-)
LOC110518132 mkk6a coding downstream 185953 93286453 ~ 93311362 (-)
LOC110487423 gys1 coding upstream 12388 93513854 ~ 93541202 (-)
LOC110487463 LOC106606238 coding upstream 126060 93627526 ~ 93660689 (-)
LOC110487422 LOC106606377 coding upstream 166816 93668282 ~ 93683137 (-)
p-ras LOC101485266 coding upstream 213697 93715163 ~ 93725341 (-)
LOC118937784 LOC105029052 coding upstream 227553 93729019 ~ 93795410 (-)
G1128515 NA non-coding downstream 32977 93405426 ~ 93464338 (-)
G1128533 NA non-coding downstream 35008 93413803 ~ 93462307 (-)
G1128519 NA non-coding downstream 50853 93415935 ~ 93446462 (-)
G1128536 NA non-coding downstream 58558 93437802 ~ 93438757 (-)
G1128526 NA non-coding downstream 64840 93421097 ~ 93432475 (-)
G1128554 NA non-coding upstream 40498 93541964 ~ 93542208 (-)
G1128566 NA non-coding upstream 71746 93573212 ~ 93573822 (-)
G1128571 NA non-coding upstream 78059 93579525 ~ 93579725 (-)
G1128572 NA non-coding upstream 82507 93583973 ~ 93585036 (-)
G1128575 NA non-coding upstream 86345 93587811 ~ 93588112 (-)
G1127792 NA other downstream 643207 92850300 ~ 92854108 (-)
G1127739 NA other downstream 742183 92754879 ~ 92755132 (-)
G1127735 NA other downstream 749100 92747794 ~ 92748215 (-)
G1127726 NA other downstream 778848 92715049 ~ 92718467 (-)
G1128567 LOC106606382 other upstream 72599 93574065 ~ 93577988 (-)
G1128609 NA other upstream 188219 93689685 ~ 93690320 (-)
G1128616 NA other upstream 201529 93702995 ~ 93707636 (-)
G1128731 LOC106595797 other upstream 505112 94006578 ~ 94116184 (-)

Expression


Co-expression Network