LOC118937791


Basic Information

Item Value
gene id LOC118937791
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 94185475 ~ 94188149 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005035217.1
AACCGACAATAATATCACAGCCAGTAGCATCCCAGCCACATGGAGATCATGTCAATTACGACTGCTGGAAATGCCTGTTCTTCTGCAATGAATTGGTGAAACTTGACCCAACCCAGTCGACTGCTTTGGACCAGATCCCAAAGGAGCAGAGTGCCTCACACTTGTGGCAGGACTCAATGAAGCTTTGATACTAAGTTCAGCCAAGAAGGTCCCTGTCAGGGAATCCACCAACCCTGATAAGTTTCTCCAGGAGCATCTGGATCCCAGGTTCCCGAGGGAACACAGCCAAACGTTACGGGAAAGATAATGAGCTGATGGCCTCCCAGCCCAGTGGTGTAAAGATAATGAGCTGATGGCCTCCCAGCCCAGTGGTGTAAAGATAATGAGCTGATGGCCTCCCAGCCCAGTGGTGTAAAGATAATGAGCTGATGGCCTCCCAGCCCAGTGGTGTAAAGATAATGAGCTGATGGCCTCCCAGCCCAGTGGTGTAAAGATAATGAGCTGATGGCCTCCCAGCCCAGTGGTGTAAAGATAATGAGCTGATGGCCTCCcaaaccagtggtgtaaagataATGAGCTGATGGCCTCCCAGCCCAGTGGTGTAAAGATTATGAGCTGATGGCCTCCCAGCCCAGTGGTGTAAAGATAATGAGCTGATGGCCTCCCAGCCCAGTAGTGTAAAGATAATGAGCTGATGGCCTCCCAGCCCAGTGGTGTAAAGATAATGAGCTGATGGCCTCCCAGCCCAGTGGTGTAAAGATAATGAGCTGATGGCCTCCCAGCCCAGTAGTGGAAAGATAATGAGCTGATGGCCTCCCAGCCCAGTGGTGTAAAGATAATGAGTTGATGGCCTCCCAGCCCAGTGGTGTAAAGATAATGAGCTGATGGCCTCCCAGCCCAGTGGTGTAAAGATAATGAGCTGATGGCCTCCCAGCCCAGTGGTGTAAAGATAATGAGCTGATGGCCTCCCAGCCCAGTGGTGTAAAGATAATGAGCTGATGGCCTCCCAGCCCAGTGGTGTAAAGATAATGAGCTGATGGCCTCCCAGCCCAGTGGTGTAAAGATAATGAGCTGATGGCCTCCCAGCCCAGTGGTGTAAAGATAACGAGCTGATGGCCTCCCAGCCCAGTGGTGTAAAGATAAGATGGAGTGAAGTTGCAGAGGGGATGGAGGACGGAGGGATGTGGAGTGGAAAGAGGAATCCTTGGAGACAAGAAGCAGGGACAGAAAGGAAAAGATGAGTCGTTCCACGAAGAGtttcctttgatattttaagGTCAACTCTGTGACCTGCTCCAGCTCCCCTCCCTGGTGCTAGAAGGTGCCAGGCTCTCCAGCATTaggcactcctgccaccatcatttagGCCCAGCCGGCTTGCCCAGTGCCCGTTCCTCGGCTGGCCCGTCAGGATCGCCCAGGAGCTACGCCGAGTGGCGCCcctagagaggggagggggggtactgtcacacctgctcccgctcccctCTTTGTTGCTAGGAGGTGCCAGGCTCTCCAGCATTAGGCACTCCGGCcaccttcattacgcacacctgcctttccACCATCACGTgcatcagcgattattggactcatCTGGACTCAATCCcctctgtcattacctcccctatatctgtctggttcCCCTCTCTATTCCCTGCTGCAGCATTAATGTTCATATGTCCTTGTTcacccgtgtgctgacgctggTCCTGTGTTGTTACCTGTCTGTTCCTTATTAAATGtcaactccccgtacctgcttctcatctccagtgACGGTCCTTACAGTGAGCTGAACTCTcgttttaaaggtagactcagcgatatgatgtAGATACAGAAAGTAAACAGCTTAGTGGGCCAATTCTCACAACCTCTAAGAGCGTTGAAGCGTGAAGCTCAACCTCTCCGCTCTTTTGATGGCCTGGCCACCACGCTGTACACAGTGTGAAGTGTACCcgtgcacatgcgcagatactTTGTGTTACTGTGTGAGAGTGAAGTGTTGCATCTCGCCCATCTCAATATCTCcggtgctgctcgtggcaacaTCATTTTGTTGAGTCTAATTAATATGGggaaactattcctttttaaataGTTTTATCAAAGAAACATtaaacatctaatagtcaaatcatattgcaaaagcaggtgagctggttctactcttctTGGAAATTTTGTGGTGGAAAGCTGAGCAGATTGAGTATAATGTAGATAA

Function

NR:

description
PREDICTED: uncharacterized protein LOC106603523 isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005035217.1 True 2227 mRNA 0.51 3 94185475 94188149

Neighbor

gene id symbol gene type direction distance location
LOC110507112 LOC106596372 coding downstream 46813 94135129 ~ 94138662 (-)
LOC110514005 LOC106601187 coding downstream 212332 93944638 ~ 93973143 (-)
LOC118937783 LOC105029051 coding downstream 345848 93803068 ~ 93839627 (-)
LOC118937784 LOC105029052 coding downstream 390065 93729019 ~ 93795410 (-)
p-ras LOC101485266 coding downstream 460161 93715163 ~ 93725341 (-)
LOC118937795 LOC106601473 coding upstream 161593 94349742 ~ 94357254 (-)
LOC110513422 LOC106606297 coding upstream 172190 94360207 ~ 94369276 (-)
LOC110513417 LOC106606297 coding upstream 182689 94370838 ~ 94376967 (-)
LOC118937793 NA coding upstream 190515 94378664 ~ 94387783 (-)
LOC110513423 LOC106606290 coding upstream 203670 94391819 ~ 94401485 (-)
G1128789 NA non-coding downstream 29558 94155689 ~ 94155917 (-)
G1128763 LOC106606375 non-coding downstream 45792 94123475 ~ 94139683 (-)
G1128759 LOC106606375 non-coding downstream 54561 94129173 ~ 94130914 (-)
G1128764 NA non-coding downstream 60163 94123972 ~ 94125312 (-)
G1128777 NA non-coding downstream 67185 94118051 ~ 94118290 (-)
G1128806 NA non-coding upstream 51861 94240010 ~ 94241908 (-)
G1128821 LOC106606284 non-coding upstream 80669 94268818 ~ 94272567 (-)
G1128760 NA non-coding upstream 89413 94277562 ~ 94282382 (-)
G1129092 LOC106606287 non-coding upstream 96804 94284953 ~ 94285538 (-)
G1129143 NA non-coding upstream 159659 94347808 ~ 94355963 (-)
LOC110487111 LOC106606373 other downstream 3878 94179962 ~ 94190977 (-)
G1128731 LOC106595797 other downstream 69291 94006578 ~ 94116184 (-)
G1128616 NA other downstream 477839 93702995 ~ 93707636 (-)
G1128609 NA other downstream 495155 93689685 ~ 93690320 (-)
G1128814 NA other upstream 62852 94251001 ~ 94252388 (-)
G1128822 LOC106606284 other upstream 86413 94274562 ~ 94275182 (-)
LOC110511881 LOC106606292 other upstream 263466 94450540 ~ 94464106 (-)
G1129544 NA other upstream 904473 95092622 ~ 95093093 (-)
G1129951 NA other upstream 1204052 95392201 ~ 95393967 (-)

Expression


Co-expression Network