LOC110511881 (LOC106606292)


Basic Information

Item Value
gene id LOC110511881
gene name LOC106606292
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 94450540 ~ 94464106 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036939306.1
AAGCTGAAGAGCTCATATTGCGcgacattgacatgattggtttaCGGTAAGTGAGGCGGTacttcctgtataaacacaaactccttcccttgacaacttccttccaGCAGTGTGTATCAGGGagattcctagatgtgagaagtgtgcaggaggaccTGAGagaaaggaatgtgtagtattgaTGTAAAAACTTGTGTGTATAAACTGTAGGGGTACACATGGTGCTGGAGATCAGATGTGTCCggtgagagaaagacaggttgAGGTTACCAGGATCACAGTAGTGCAGAAGGTGgtgtatgctgaggcagtgaagggagtagtagaggaagatgggtccaggGTGAAGGATCCTAAGAGGATACCTGTGATTAGGCCgagGTCAATAGAGAGTGATAAGAATAACATGCTTCAGTAAGATTCATTTTTTTGGTGTTCATGGCCATGGTTGTCAACCGTACCGCAGGAATAGAATGTAAAACACAGtggatagatgttgtggtggcagctgttGAGAAGTACTTGGATGTACAATATTTTACTGCAGAGTTACAAGGCGTTTTGAACGATAATATCCCGTCCTCCCAGTCTGCTGGTCTGGTGTTGAATCAGAGGGCCAAAGTAGTGGAATAATGATGTTtaaatgggtgtagggttagttggttgGGCATTTTTTTCAAAGGTGTAATAATTTCCTTCTACAGAATAGAACTACAAAATAGTAAGCTGATAAACAGACAAATCAGTAGGTGGCGACATGCACTTATAACAATTGTATGCGAAGCGCTAGAATACAAAGAAGAAGAAGGCCGTTTCCTTTTTAACAGCCCTTGAATCGCTGGAAGTCTTGACTTCGACCACGGTTGCATTGCTGTAAATGGACACTGAAGACGTCGGATTGAACATACATCGGGTTTTACTGGTTCACTGCACGGATAGCGCTGCTGCAATCAGTCTGGTATTTTATAGGCGTCCATTACTGGGCCTTAGAGAATTACAACTATCTGGACTCTCGAAGAGGACGTTGTTCCAACAGACTCTCGGGTGGAGTTAGACGATAACAGATAACATGATTCACGATGAATAGGGTGTTGAACATTTTATTGACTTTAATAGATCAGAAACGCTGAAGAAAGAATAGCTTCAATGATGGATCGGGACAGAGCTAGTCCGTCCCCCTCCAACCTGCCGGAGTCCCCTGGTCACAactctcctggtagcgccttacTGCTGGATCTGAAGAGGGTGTTTGTGCGGCTGGTCGACTGCAGGAAAACACCAGGgcagagtggaactgtgagagaagGACACAAGGAGGGAGATTTGATATCATCAAGGGACACCCCTAACTCTCGTTCTCTCAGTGGGAGGGGCTTATCATCTGGGGAGCCTCAGCCACACAATGTTGctgaagagacagagaagactcTCTCCAAATCAGAACATCTCAAGAAACCCCAGCAGAGACGTACAGGGAAGAAACCTCACCACTGCTGCTCTAACTGTGGGAAGAATTTCACAAGCCGAAGTGGCTTCATTATTCACCAGCGGATTCACACCGGAAAGAAACCGTACTGctgctctcagtgtgggaagagtttcactgCTTCTCAAACCTTAAAATATCATCTGAGAATTCATTCAGGGGAGAGGCCTTACCCCTGCCTTGATTGTGGGAAAAGCTTTGCTTATTTGGGCGCCCTAAACATACACAAGCTAACACACACTGGagtgaagccttatagctgtgatcaatgtgggaagagtttcagtcAGTCTGGACACCTGACAACACACCAACTAACACACACTGGAGTGAAGCCttttagctgtgatcagtgtgggaagagctttgctctAACTTCCTCCCTGACTAGACACCAGCgtacacacactggagagaaaccttatgtctgtctatgtgggaagagctttgctgtaGCTTCCAATCTGACtacacaccagcgaacacacaccaGAGATAAGCCTTATAGTTGTtatcagtgtggaaagagctttgctTCTTCAGAAACACTAATTATACACCAGCGCATACACACAGCAAAGAAACCTTTTTGCTGtggtcagtgtgggaagagctttgctgtaGCTTTCTCCCTGATtatacaccagcgaacacacactggcGAGAAGCCTTATacctgtgatcagtgtgggaagagcttcagtcAATCAGTACACCTGAAtacacaccagcgaacacacactggagagaaaccttatacctgtgatcagtgtgggaagagcttcagtcAATCAGGAAACCTAAATTCACACCagcaaacacacactggagagaaaccttagaTGTGTGGAAAGCTTTGTTCATTTAGGGCCTATGTGGAAAAACACCAGAAAACTACAAATGTCTTGTATTTAATTTTGCCTCCTATCTGACACCGGTTCCAGATCCCTAAATAAAAGGATCAATAGAAAACA
>TU1284503
TTGCATTGCTGTAAATGGACACTGAAGACGTCGGATTGAACATACATCGGGTTTTACTGGTTCACTGCACGGATAGCGCTGCTGCAATCAGTCTGGTATTTTATAGGCGTCCATTACTGGGCCTTAGAGAATTACAACTATCTGGACTCTCGAAGAGGACGTTGTTCCAACAGACTCTCGGGTGGAGTTAGACGATAACAGATAACATGATTCACGATGAATAGGGTGTTGAACATTTTATTGACTTTAATAGATCAGAAACGCTGAAGAAAGAATAGCTTCAATGATGGATCGGGACAGAGCTAGTCCGTCCCCCTCCAACCTGCCGGAGTCCCCTGGTCACAactctcctggtagcgccttacTGCTGGATCTGAAGAGGGTGTTTGTGCGGCTGGTCGACTGCAGGAAAACACCAGGgcagagtggaactgtgagagaagGACACAAGGAGGGAGATTTGATATCATCAAGGGACACCCCTAACTCTCGTTCTCTCAGTGGGAGGGGCTTATCATCTGG

Function

NR:

description
zinc finger protein 664-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036939306.1 False 2460 mRNA 0.45 5 94450540 94464106
TU1284503 True 522 TUCP 0.48 4 94451615 94458198

Neighbor

gene id symbol gene type direction distance location
LOC110485288 LOC106606293 coding downstream 6439 94404290 ~ 94444101 (-)
LOC110513423 LOC106606290 coding downstream 49055 94391819 ~ 94401485 (-)
LOC118937793 NA coding downstream 62757 94378664 ~ 94387783 (-)
LOC110513417 LOC106606297 coding downstream 73573 94370838 ~ 94376967 (-)
LOC110513422 LOC106606297 coding downstream 81264 94360207 ~ 94369276 (-)
LOC110487108 LOC106606286 coding upstream 89539 94553645 ~ 94686176 (-)
LOC118936511 LOC106606311 coding upstream 230765 94694871 ~ 94708707 (-)
LOC110485321 LOC106606309 coding upstream 249838 94713944 ~ 94786271 (-)
LOC110539029 LOC106601741 coding upstream 790525 95254631 ~ 95268488 (-)
LOC110538752 LOC106606738 coding upstream 805255 95269361 ~ 95278094 (-)
G1129152 NA non-coding downstream 34992 94414015 ~ 94415548 (-)
G1129108 LOC106606290 non-coding downstream 57500 94350648 ~ 94393040 (-)
G1129143 NA non-coding downstream 94577 94347808 ~ 94355963 (-)
G1129206 NA non-coding upstream 66628 94530734 ~ 94531081 (-)
G1129210 NA non-coding upstream 78635 94542741 ~ 94542951 (-)
G1129214 NA non-coding upstream 81437 94545543 ~ 94547248 (-)
G1129215 NA non-coding upstream 84131 94548237 ~ 94548520 (-)
G1129235 NA non-coding upstream 152300 94616406 ~ 94618846 (-)
G1128822 LOC106606284 other downstream 175358 94274562 ~ 94275182 (-)
G1128814 NA other downstream 198152 94251001 ~ 94252388 (-)
LOC110487111 LOC106606373 other downstream 268943 94179962 ~ 94190977 (-)
G1128731 LOC106595797 other downstream 334356 94006578 ~ 94116184 (-)
p-ras LOC101485266 other downstream 725199 93715163 ~ 93725341 (-)
G1129544 NA other upstream 628516 95092622 ~ 95093093 (-)
G1129951 NA other upstream 928095 95392201 ~ 95393967 (-)
G1130049 NA other upstream 1161652 95625758 ~ 95626165 (-)
G1130145 NA other upstream 1381001 95845107 ~ 95846283 (-)
LOC110516715 LOC103469064 other upstream 1928293 96392239 ~ 96435793 (-)

Expression


Co-expression Network