LOC118937794 (LOC106606292)


Basic Information

Item Value
gene id LOC118937794
gene name LOC106606292
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 94482824 ~ 94492609 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036939272.1
gtaggtggcggtacaatttaaacaccacagaagaagccgaAAAACATCAACAGGAAGTGCTTTGTTACCGTCCTCTTGCGTTTTTAAACCAAATAAAGAGCCACAGGCTTTTGCTGGATCTTTTCGGATGTAAAATTAGTCTACATGAAACGTTTATTTGTCCCAATTTGAAATCGAGTTTTGATAATTAATTAGGTGTGATCTAGCTTTTATTTGTTTGAACGCTACGACAAGGAAATTAACTGCAGTGTACACATTCACTTTCTTGTTTGTTATTTGAAACGTTGAAGAACGAATACAGTAGCTTCCACTATGGATCGGGACAGAGCTAGCCCGTCCCCCTCCAACCTGCCAGAGTCCCCTGGTCACAACTCTCCGGGTAGCTCCTTACTGCTGGGTCTGAAGAGGGTGTCTGTGCGGCTGGTCGACTGCAGGAAAACACCAGGgcagagtggaactgtgagagaagGACACGAGGAGGAGGGAGATTTGATTTCATCAAGTAAGAACAATGGGGggactctcctcctctcagtggGAGGAACTTATCATCTGGGGAGCTTCAACAACAACATgttgctgacgaggcagagaagagtgtCTCCCAATCAGAACACCTCAAACACCAGCACAGACGTACAGGGAAGAAATCTCACCacagctgctctgactgtgggaagagtttcactaCACGGAGGTCCTTCATAATTCACCTGCGTATTCAcaccggagagaagccttatcactgttatcagtgtggaaagagcttcAATCAGTCAGGCAACCTGACAACACACCAGCTAACACATACTGGagtgaagccttatagctgtgatcagtgtgggaagagctttgctcgGTCTGGACAGCTGACTACACACCGggtaacacacactggagag
>XM_036939271.1
aacaccacagaagaagccgaAAAACATCAACAGGAAGTGCTTTGTTACCGTCCTCTTGCGTTTTTAAACCAAATAAAGAGCCACAGGCTTTTGCTGGATCTTTTCGGATGTAAAATTAGTCTACATGAAACGTTTATTTGTCCCAATTTGAAATCGAGTTTTGATAATTAATTAGGTGTGATCTAGCTTTTATTTGTTTGAACGCTACGACAAGGAAATTAACTGCAGTGTACACATTCACTTTCTTGTTTGTTATTTGAAACGTTGAAGAACGAATACAGTAGCTTCCACTATGGATCGGGACAGAGCTAGCCCGTCCCCCTCCAACCTGCCAGAGTCCCCTGGTCACAACTCTCCGGGTAGCTCCTTACTGCTGGGTCTGAAGAGGGTGTCTGTGCGGCTGGTCGACTGCAGGAAAACACCAGGgcagagtggaactgtgagagaagGACACGAGGAGGAGGGAGATTTGATTTCATCAAGggactctcctcctctcagtggGAGGAACTTATCATCTGGGGAGCTTCAACAACAACATgttgctgacgaggcagagaagagtgtCTCCCAATCAGAACACCTCAAACACCAGCACAGACGTACAGGGAAGAAATCTCACCacagctgctctgactgtgggaagagtttcactaCACGGAGGTCCTTCATAATTCACCTGCGTATTCAcaccggagagaagccttatcactgttatcagtgtggaaagagcttcAATCAGTCAGGCAACCTGACAACACACCAGCTAACACATACTGGagtgaagccttatagctgtgatcagtgtgggaagagctttgctcgGTCTGGACAGCTGACTACACACCGggtaacacacactggagagaagccttatagctgtggtcagtgtggaaagagctttaATCAGGCAGGCAACCTGACAGCACACCAGCTaacacacacgggagagaagccttacagctgtgatcagtgtgggaagagcttcaatcacTCAGGCAACCTGACAgcacaccaggtaacacacactggagagaagccttatagctgtgatcaatgtgggaagaggttTGCTCACGCTTCCAACCTAACTagacaccaggtaacacacacagaagagaagccttatagctgtgatcaatgtgggaagaggttTGCTCAAGCTTCCAACCTAACTAGAcatcaggtaacacacaccgaagaaaagccttacagctgtgatcaatgtgggaagagttttgctacATATTACACATTCAAATATCATCTGAGAattcatacaggggagaagccttacccctGCCTTGATTGTGGGAAAAACTTTGCGAGTGCAGGATCCCTAACCATACACCAGAgtgtacacacaggagagaagccttatagctgtcatcagtgtgggaagagctttgctgtaGCTAACACCCTGATTATACACCAGCGcattcacactggagagaagccataTAGCTGTAATCtgtgtggaaagagctttgctgTGGTTTCCACCTTGAATAAACATCAGCgcatacacactggagagaagccatatagctgtgatcagtgtgggaagagctttgctctATCAGATAAACTAACtatacaccagcgaacacacacaggagagaggccttatagctgtgatcagtgtggaaagagctttgctcGAGCTTCCACCCTGAAttcacaccagcgaacacacactggagagaagccttatagctgtgatcagtgtggaaagagctttgctgAGTTAGGGACCCTGAAttcacaccagcgaacacacactggagagaaaccctatgtctgtctatgtggaaagagtttttctCTTTTAGGGCAAATTAAAAAACACCAGAAATCAAAAACGTGCCATATTTCATCTCCATCCTATACCCGACAGTGGTTATAGATCCCTAAATTAAAGGCTCTATAGAAAACATATCCATCTCCCATTCTTAAACAGTTGACTTAGTCTGATCACCATGGTAACCTCTGTGGAGCATAATATGCagctctgatctaggatcaggtctcccctgTGTCTTTGTAATATCACACATTGGGATCTAAATGGATAAATGTTATCATAGACAATGTCAtattgtgtgtggggggagggggtgatgTTGATAATTGTATCGTCTTTCATATACTCATGATACTATTATTAAATCTCATTATGCATAATGTTTCAACAATAGTTGTATATTCATGTATTCAATTAATCAATAAATCCAATCCAATATCTTATA

Function

NR:

description
zinc finger protein OZF-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036939272.1 False 902 mRNA 0.47 3 94482824 94491225
XM_036939271.1 True 2252 mRNA 0.44 3 94482844 94492609

Neighbor

gene id symbol gene type direction distance location
LOC110516947 LOC106606288 coding upstream 142843 94330941 ~ 94339981 (+)
LOC110487474 LOC106606297 coding upstream 155009 94283880 ~ 94327815 (+)
LOC110487157 LOC106606292 coding upstream 181396 94292434 ~ 94301428 (+)
LOC118937792 LOC106601968 coding upstream 204739 94204536 ~ 94282403 (+)
LOC118937790 LOC106592986 coding upstream 351911 94124352 ~ 94130915 (+)
LOC118937796 NA coding downstream 1190 94493799 ~ 94497235 (+)
LOC110485292 LOC106606295 coding downstream 15621 94508230 ~ 94543100 (+)
LOC118937834 LOC106606288 coding downstream 27874 94519990 ~ 94524727 (+)
LOC118937797 NA coding downstream 194590 94687199 ~ 94687631 (+)
LOC110516622 LOC105012861 coding downstream 441776 94934381 ~ 95232039 (+)
G1128873 NA non-coding upstream 31161 94391333 ~ 94451663 (+)
G1128903 NA non-coding upstream 57819 94424509 ~ 94425005 (+)
G1128870 NA non-coding upstream 125381 94348875 ~ 94357443 (+)
G1128832 NA non-coding upstream 176840 94305261 ~ 94305984 (+)
G1128944 NA non-coding downstream 7865 94500474 ~ 94521370 (+)
LOC110485287 NA non-coding downstream 13986 94468279 ~ 94525947 (+)
G1128851 NA non-coding downstream 44096 94536705 ~ 94537213 (+)
G1128954 NA non-coding downstream 57076 94549685 ~ 94550049 (+)
LOC110485300 LOC106581592 other upstream 398654 94065500 ~ 94116043 (+)
G1128318 NA other upstream 639727 93842769 ~ 93843097 (+)
LOC110534257 dpod1 other upstream 880699 93544837 ~ 93602139 (+)
G1128189 NA other upstream 1025864 93455845 ~ 93456960 (+)
G1128105 NA other upstream 1210564 93271888 ~ 93272260 (+)
G1129047 NA other downstream 245160 94737769 ~ 94833934 (+)
G1129576 NA other downstream 701777 95194386 ~ 95195280 (+)
G1129591 LOC106601742 other downstream 759811 95252420 ~ 95253323 (+)
G1129601 LOC106601741 other downstream 773909 95266518 ~ 95267056 (+)

Expression


Co-expression Network