Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110538778 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 95995245 ~ 95996642 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_002475813.2 | False | 928 | mRNA | 0.42 | 4 | 95995245 | 95996642 |
| TU1285850 | False | 426 | lncRNA | 0.47 | 3 | 95995893 | 95996603 |
| TU1285851 | True | 512 | lncRNA | 0.45 | 2 | 95995893 | 95996603 |
95,994,000
95,994,400
95,994,800
95,995,200
95,995,600
95,996,000
95,996,400
95,996,800
95,997,200
95,997,600
95,998,000
95,998,400
95,998,800
95,999,200
95,999,600
96,000,000
96,000,400
96,000,800
NC_048576.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110486837 | LOC105026133 | coding | downstream | 374107 | 95395260 ~ 95621138 (-) |
| LOC118937798 | LOC106606721 | coding | downstream | 606764 | 95380385 ~ 95388481 (-) |
| LOC110538756 | LOC108245165 | coding | downstream | 685482 | 95300960 ~ 95309763 (-) |
| LOC118936310 | LOC106601672 | coding | downstream | 699137 | 95287208 ~ 95296108 (-) |
| LOC110538752 | LOC106606738 | coding | downstream | 717151 | 95269361 ~ 95278094 (-) |
| LOC118937801 | NA | coding | upstream | 309226 | 96209246 ~ 96313547 (-) |
| LOC118937802 | fbxl16 | coding | upstream | 317684 | 96314326 ~ 96365986 (-) |
| LOC110516715 | LOC103469064 | coding | upstream | 395597 | 96392239 ~ 96435793 (-) |
| LOC110538851 | LOC106601944 | coding | upstream | 501902 | 96498544 ~ 96505238 (-) |
| LOC110494398 | clg11h16orf89 | coding | upstream | 608732 | 96605374 ~ 96610119 (-) |
| G1130227 | NA | non-coding | downstream | 504 | 95992411 ~ 95994741 (-) |
| G1130237 | NA | non-coding | downstream | 20664 | 95974381 ~ 95974581 (-) |
| G1130236 | NA | non-coding | downstream | 23055 | 95971809 ~ 95972190 (-) |
| G1130231 | NA | non-coding | downstream | 48092 | 95946937 ~ 95947153 (-) |
| G1130172 | NA | non-coding | downstream | 56636 | 95938387 ~ 95938609 (-) |
| G1130273 | NA | non-coding | upstream | 32646 | 96029288 ~ 96030674 (-) |
| G1130270 | NA | non-coding | upstream | 61154 | 96057796 ~ 96063100 (-) |
| G1130276 | NA | non-coding | upstream | 67528 | 96064170 ~ 96065321 (-) |
| G1130279 | LOC106601757 | non-coding | upstream | 71995 | 96068637 ~ 96069175 (-) |
| G1130294 | LOC106606683 | non-coding | upstream | 101145 | 96097787 ~ 96099536 (-) |
| G1130145 | NA | other | downstream | 148962 | 95845107 ~ 95846283 (-) |
| G1130049 | NA | other | downstream | 369080 | 95625758 ~ 95626165 (-) |
| G1129951 | NA | other | downstream | 601278 | 95392201 ~ 95393967 (-) |
| G1129544 | NA | other | downstream | 902152 | 95092622 ~ 95093093 (-) |
| LOC110511881 | LOC106606292 | other | downstream | 1537047 | 94450540 ~ 94464106 (-) |
| G1130893 | NA | other | upstream | 705765 | 96701694 ~ 96705588 (-) |
| LOC110518479 | LOC106591170 | other | upstream | 718149 | 96714290 ~ 96728931 (-) |
| LOC110487147 | LOC106601974 | other | upstream | 865501 | 96858442 ~ 96867462 (-) |
| LOC110519445 | smg1 | other | upstream | 979533 | 96898792 ~ 97043408 (-) |
| LOC118937923 | NA | coding | downstream | 363 | 95995389 ~ 95995530 (-) |
