eef2kmt (fa86a)


Basic Information

Item Value
gene id eef2kmt
gene name fa86a
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 96633414 ~ 96637111 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036939381.1
GGCCCACAGATACATGTTCTATTGGGAAATAACATACAGTTCTCATCTCATTGTAAAGGTTTTCTCATTTgtactttctttaaaaaaaaaaaagatgtatcCCTTATCACGTTACTGTCTGTCATGATTATACTACATTGACCATCAGGCATTGCGACAGGAGGAGTGCTTCTTGGGTAAAAGAGGAAGACAACAAACTCAGGGAAACACGTGGCCAGCCTGTGGTTTAGTGTAATTCAATTCTCGGCTGGTTTAAAATTAACGAAATGTATCTGTCTAAGGATCAGACCGACAAAACCAAAGTCACGTGCACAAGGAATAGAGCAGACGTTATATATGACTTTAAAGTCTCCTTTTTCACTATGGGTCAACTGCCAAATTTCCCATGGAATTTCCTTGAAAGGGAGCTCGAGAACGACAGCTCATCAGAAATTATTCTAGACATTCTAAAGCAGACATGCCTTCATCCACTGTGCTGTAAACATCCTCCCTCAGTAAGATATAGGAGACTGTTTCTGTCTCGGCTCATCAAAAGGCATGAAGCCAGTGGGAAGGAGCCCCTGGATGAGCTCTATGATGCACTGGGTGAAGTcctgggggtagaggaggggacagagtgCTACAAGAGCTATTTACTgccgtgTGGAGAGGCAGTGAGTCTATCAGAGAGTACAGCTGTGATCTCTGAAGGAACTACAGGCCTGGTCACATGGGAGGCAGCTCTTTACCTCGCTGAATGGGCTCTGGAGAACACACACCTCTTCACTGATAGGACAGTCCTAGAGCTGGGCAGTGGTGTAGGGTTGACTGGTATAGCAGTGTGTAGGTCCTGCAGACCCTCCAGCTACGTGTTCAGTGACTGTCACCTCAGCGTTCTACATAGACTGAGGGACAACGTCCAGCTCAATGGGCTGGACAACCAGAACTCTCCCAGAGTGAGTGTGGAGCATCTGGACTGGGAGGAGGTGACAGAGAAGCAGCTGAGAGAGATCGGAGCCGCCACGGTCATCGCTGCAGACGTAGTTTACGATCCAGATATCATTGGCTGTCTGGTGAAGCTTCTCTCTAAGATCCTGAGGTGTTCGGCCAATGGCAGCCCTCCTGATGTCTACATCTCCTCCACCATCAGAAACCCCGACACATACAGCAGTTTTAGACACCAGCTAGAAAGTTCTGGAATCCAACATGAGGTCATGACAGGACCAGTGACCCATGTGTTCTTTTACAACAGACAAGCCACCATAGAGATGATCAAACTCTACATATAATAATAGCATCCTATTCCCAttgtaagtgcactacttttgaccagggtccatagggctgtggtcaaaagtagtgcactacatagggaatagggtgccatttgggatgcacacaataTGAGACCAAGCCAGAACCAGATGTGTATTACTGTGTAATAAAGTCTTTATTTACATCAAAATATT
>TU1286780
GTcctgggggtagaggaggggacagagtgCTACAAGAGCTATTTACTgccgtgTGGAGAGGCAGTGAGTCTATCAGAGAGTACAGCTGTGATCTCTGAAGGAACTACAGGCCTGGTCACATGGGAGGCAGCTCTTTACCTCGCTGAATGGGCTCTGGAGAACACACACCTCTTCACTGATAGGACAGTCCTAGAGCTGGGCAGTGGTGTAGGGTTGACTGGTATAGCAGTGTGTAGGTCCTGCAGACCCTCCAGCTACGTGTTCAGTGACTGTCACCTCAGCGTTCTACATAGACTGAGGGACAACGTCCAGCTCAATGGGCTGGACAACCAGAACTCTCCCAGAGTGAGTGTGGAGCATCTGGACTGGGAGGAGGTGACAGAGAAGCAGCTGAGAGAGATCGGAGCCGCCACGGTCATCGCTGCAGACGTAGTTTACGATCCAGATATCATTGGCTGTCTGGTGAAGCTTCTCTCTAAGATCCTGAGGTGTTCGGCCAATGGCAGCCCTCCTGATGTCTACATCTCCTCCACCATCAGAAACCCCGACACATACAGCAGTTTTAGACACCAGCTAGAAAGTTCTGGAATCCAACATGAGGTCATGACAGGACCAGTGACCCATGTGTTCTTTTACAACAGACAAGCCACCATAGAGATGATCAAACTCTACATATAATAATAGCATCCTATTCCCAttgtaagtgcactacttttgaccagggtccatagggctgtggtcaaaagtagtgcactacatagggaatagggtgccatttgggatgcacacaataTGAGACCAAGCCAGAA

Function

NR:

description
LOW QUALITY PROTEIN: protein-lysine N-methyltransferase EEF2KMT-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036939381.1 False 1448 mRNA 0.46 8 96633414 96637111
TU1286780 True 809 lncRNA 0.51 5 96633463 96636087

Neighbor

gene id symbol gene type direction distance location
LOC110494398 clg11h16orf89 coding downstream 23295 96605374 ~ 96610119 (-)
LOC110538851 LOC106601944 coding downstream 128176 96498544 ~ 96505238 (-)
LOC110516715 LOC103469064 coding downstream 197621 96392239 ~ 96435793 (-)
LOC118937802 fbxl16 coding downstream 267428 96314326 ~ 96365986 (-)
LOC118937801 NA coding downstream 320409 96209246 ~ 96313547 (-)
LOC110518479 LOC106591170 coding upstream 77179 96714290 ~ 96728931 (-)
LOC118937835 LOC106591170 coding upstream 91871 96728982 ~ 96753421 (-)
LOC110485334 LOC106596281 coding upstream 204500 96841611 ~ 96845185 (-)
LOC110487147 LOC106601974 coding upstream 221331 96858442 ~ 96867462 (-)
LOC110487148 ar6p1 coding upstream 237673 96874784 ~ 96897190 (-)
G1130860 NA non-coding downstream 692 96626010 ~ 96632722 (-)
G1130841 NA non-coding downstream 32550 96600337 ~ 96600864 (-)
G1130842 NA non-coding downstream 39026 96593806 ~ 96594388 (-)
G1130847 LOC106601992 non-coding downstream 50402 96582510 ~ 96583012 (-)
G1130845 NA non-coding downstream 53427 96579630 ~ 96579987 (-)
G1130866 NA non-coding upstream 4783 96641894 ~ 96642504 (-)
G1130870 NA non-coding upstream 25772 96662883 ~ 96663702 (-)
G1130872 NA non-coding upstream 27655 96664766 ~ 96913614 (-)
G1130876 NA non-coding upstream 33161 96670272 ~ 96670839 (-)
G1130877 NA non-coding upstream 34779 96671890 ~ 96672619 (-)
G1130145 NA other downstream 787131 95845107 ~ 95846283 (-)
G1130049 NA other downstream 1007249 95625758 ~ 95626165 (-)
G1129951 NA other downstream 1239447 95392201 ~ 95393967 (-)
G1129544 NA other downstream 1540321 95092622 ~ 95093093 (-)
G1130893 NA other upstream 65296 96701694 ~ 96705588 (-)
LOC110519445 smg1 other upstream 339064 96898792 ~ 97043408 (-)
LOC110515892 syt17 other upstream 466379 97078111 ~ 97137134 (-)

Expression


Co-expression Network