LOC118937836


Basic Information

Item Value
gene id LOC118937836
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 97443985 ~ 97447215 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036939562.1
ATGTTCTGGTGTGTTCAATCCATACGCTAttgggttagtcaggctgatcaaCAAGTGTCAATAAGGTGttgggttagtcaggctgatcaaCAAGTGTCAATAAGGTGttgggttagtcaggctgatcaaCAAGTGTCAATAAGGTGttgggttagtcaggctgatcagCAAGTGTCAATAAGGTGttgggttagtcaggctgatcaaCAAGTGTCAATAAGGTGttgggttagtcaggctgatcaaCAAGTGTCAATAAGGTGttgggttagtcaggctgatcagCAAGTGTCAATAAGGTGttgggttagtcaggctgatcaaCAAGTGTCAATAAGGTGttgggttagtcaggctgatcaaCAAGTGTCAATAAGGTGTTGGGTTCGTCAGGCTGATCAACAAGTCTCAATAAGGTGTTGGGCTAGTCAGGCTGATCAACAAGTGTCAATAAGGTGttgggttagtcaggctgatcaaCAAGTCTCAATAAGGTGttgggttagtcaggctgatcaaCAAGTGTCAATAAGGTGttgggttagtcaggctgatcaaCAAGTGTCAATAAGGTGttgggttagtcaggctgatcaaCAAGTGTCAATAAGGTGttgggttagtcaggctgatcaaCAAGTGTCAAGGTGttgggttagtcaggctgatcaaCAAGTCTCAATAAGGTGttgggttagtcaggctgatcaaCAAGTGTCAATAAGGTGTTGTGTTAGTCAGGCTGATCAACAAGTCTCAATAAGGTGttgggttagtcaggctgatcaaCAAGTGTCAATAAGGTGttgggttagtcaggctgatcaaCAAGTGTCAATAAGGTGttgggttagtcaggctgatcaaCAAGTGTCAATAAGGTGttgggttagtcaggctgatcagCAAGTCTCAAGCCTCAAACACCTTAGTAATATATTCTGTCCATGGACTCATGCTACTCATTTTCACTGGGGGTGTGTGTCCCAAGTGGCAACTCAttctacatttgaccagggtccatatggGGGAATAGGAAGTCATTAATGACCGGGGCCCATATGAGGGGATTGGAAGTCATTAATGACCGGGGCCCATATGGGGGGAAAGGAAGTCATTAATGACCGGGGCCCATATGGGGGGATAGGGTCCCATTAGAGATGCAGCTTTTCACTGGGACATCCAGTGACTACAGCAGGTGTGTTGTCTGAAGATGGAGCCAGTAGCAGCCTACTGGGCCTTACGCTTTGATGTCGCTCTCCTGTGGCCTCACTTCTTCATTTGAGCCTTGGTTTTATTTCATATAAATCAAGAAGACGTGCTTTTTGATTTGTCTGTTGAGTGTAAGGGGTTGTCCCAaatttcaccctattccctatgtagtgcactactatgggccctattccccatgtagtgcgctactatgggccctattccctatgtagtgcactactatgggccctattccctatgtagtgcactacta

Function

NR:

description
PREDICTED: vegetative cell wall protein gp1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036939562.1 True 1486 mRNA 0.46 4 97443985 97447215

Neighbor

gene id symbol gene type direction distance location
LOC118937808 LOC106601922 coding downstream 19652 97414572 ~ 97424333 (-)
LOC110539046 LOC106596079 coding downstream 44526 97394628 ~ 97399459 (-)
LOC110538791 LOC106601922 coding downstream 57786 97378339 ~ 97386199 (-)
LOC110539048 LOC106602018 coding downstream 88029 97348134 ~ 97355956 (-)
LOC118937807 NA coding downstream 123163 97306579 ~ 97320822 (-)
LOC110538797 abcc1 coding upstream 3313 97450528 ~ 97509183 (-)
LOC110538805 LOC106592410 coding upstream 80923 97527207 ~ 97574077 (-)
LOC110539076 LOC106606268 coding upstream 173088 97620303 ~ 97715255 (-)
LOC110538885 LOC106602057 coding upstream 268523 97715738 ~ 97740971 (-)
LOC110538882 LOC106601977 coding upstream 316974 97764189 ~ 97787224 (-)
G1131256 NA non-coding downstream 4191 97434357 ~ 97439794 (-)
G1131254 NA non-coding downstream 14786 97428831 ~ 97429199 (-)
G1131234 NA non-coding downstream 16782 97388883 ~ 97427203 (-)
G1131228 LOC106601922 non-coding downstream 25376 97380234 ~ 97418609 (-)
G1131211 NA non-coding downstream 47298 97309557 ~ 97396687 (-)
G1131266 NA non-coding upstream 4549 97451764 ~ 97452113 (-)
G1131273 NA non-coding upstream 20801 97468016 ~ 97468635 (-)
G1131282 NA non-coding upstream 40475 97487690 ~ 97489374 (-)
G1131283 NA non-coding upstream 44887 97492102 ~ 97492671 (-)
G1131290 NA non-coding upstream 67523 97514738 ~ 97515187 (-)
G1131255 NA other downstream 10567 97430085 ~ 97433418 (-)
G1131230 LOC106601922 other downstream 19865 97383100 ~ 97424120 (-)
G1131229 LOC106601922 other downstream 27417 97378548 ~ 97416568 (-)
LOC118936515 LOC106606334 other downstream 280881 97158018 ~ 97163137 (-)
LOC110515892 syt17 other downstream 337229 97078111 ~ 97137134 (-)
G1131270 NA other upstream 14598 97461813 ~ 97462271 (-)
G1131656 NA other upstream 265419 97712634 ~ 97713116 (-)
G1131720 NA other upstream 405571 97852786 ~ 97853593 (-)

Expression


Co-expression Network