Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110485313 |
| gene name | LOC106535622 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 97959753 ~ 97974748 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| hypothetical protein cypCar_00005910 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036939425.1 | False | 768 | mRNA | 0.56 | 6 | 97959753 | 97974748 |
| TU1287948 | True | 701 | TUCP | 0.55 | 6 | 97959792 | 97974720 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110487083 | tigd1 | coding | downstream | 10522 | 97947278 ~ 97949231 (-) |
| LOC110487090 | LOC106606200 | coding | downstream | 15882 | 97917737 ~ 97943871 (-) |
| LOC110487093 | LOC105031326 | coding | downstream | 81177 | 97864865 ~ 97878576 (-) |
| LOC110538882 | LOC106601977 | coding | downstream | 172529 | 97764189 ~ 97787224 (-) |
| LOC110538885 | LOC106602057 | coding | downstream | 218782 | 97715738 ~ 97740971 (-) |
| LOC110518411 | LOC106606198 | coding | upstream | 5023 | 97979771 ~ 98001593 (-) |
| LOC110485327 | LOC105012792 | coding | upstream | 162326 | 98137074 ~ 98186289 (-) |
| LOC118936513 | cog1 | coding | upstream | 255615 | 98230363 ~ 98259687 (-) |
| LOC110487128 | rogdi | coding | upstream | 291307 | 98265920 ~ 98283153 (-) |
| LOC110517726 | glyr1 | coding | upstream | 308714 | 98283462 ~ 98316905 (-) |
| G1131681 | NA | non-coding | downstream | 247 | 97959174 ~ 97959506 (-) |
| G1131664 | NA | non-coding | downstream | 9013 | 97949990 ~ 97950740 (-) |
| G1131742 | NA | non-coding | downstream | 14143 | 97945313 ~ 97945610 (-) |
| G1131737 | NA | non-coding | downstream | 22881 | 97936543 ~ 97936872 (-) |
| G1131735 | NA | non-coding | downstream | 50227 | 97908811 ~ 97909526 (-) |
| G1131658 | NA | non-coding | upstream | 260 | 97975008 ~ 97975811 (-) |
| G1131680 | NA | non-coding | upstream | 2139 | 97976887 ~ 98048479 (-) |
| G1131753 | NA | non-coding | upstream | 12230 | 97986978 ~ 97990347 (-) |
| G1131754 | NA | non-coding | upstream | 14308 | 97989056 ~ 97990474 (-) |
| G1131755 | NA | non-coding | upstream | 20484 | 97995232 ~ 97995716 (-) |
| G1131666 | NA | other | downstream | 99235 | 97857599 ~ 97860518 (-) |
| G1131720 | NA | other | downstream | 106160 | 97852786 ~ 97853593 (-) |
| G1131656 | NA | other | downstream | 246637 | 97712634 ~ 97713116 (-) |
| LOC110538805 | LOC106592410 | other | downstream | 393565 | 97527207 ~ 97574077 (-) |
| G1131863 | NA | other | upstream | 408222 | 98382970 ~ 98383815 (-) |
| G1132328 | NA | other | upstream | 1031879 | 99006627 ~ 99010112 (-) |
| LOC118937838 | LOC106606233 | other | upstream | 1078756 | 99052890 ~ 99059256 (-) |
| LOC110538840 | LOC106601903 | other | upstream | 1116968 | 99090621 ~ 99092245 (-) |
