LOC110516721 (LOC105012791)


Basic Information

Item Value
gene id LOC110516721
gene name LOC105012791
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 98187732 ~ 98218285 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036939438.1
GTGACGTATGTTGGTGTCACTGTCCCACGTAACAGGTTGTTAAACCAGAGTTTAGCCGAGCTGTCATTGGTTGATAAATCCGTCCTCGCGCTTTCTGGCCCCTCTCACGCAATCTCTGACGCGCGGTCAATGGAATAAACTACTGTCCCAGCCCCGGGTATACCATTACACCTGTGTGATCACTTTTTTTCATGAACATTTCTTACCTGGATTTTCTTCTTTAGGTCCGCGTATCGACTGACCGCAAACATGACAATTAGGACGCTGAGAGATTATGGTCAGCACTACCGACCACGGATGGCATGCCTAAAAAATGTGGAGGTGTTTGTGGTTGAGATGCAGGATCCTAAGAGTGGGGTGAAGGGTGCCGACCAGAAACTCAATGTAACCATTATCCCACACGTCATCAACGGGCAGGACATTCTAGCATGGATTGTCACCAAAATGAAGGTTACCACAGAAGaGGCCCAGGCGTTTGGGACCATGCTGGTGGCCTACGGGTACATCTACCCCCTCCAGAACCACAGGAAGTTGGTCCTGGTCCCCGACAGCACCCTCTACCGCTTCCAGACCCCTTATTTCTGGCCCGTGCAGAAGTGGCCCGCTGAGGACATAGACTATGCCATCTACCTGGCCAGGAGAAACATCCGGAAGAAGGGGATGCTGGAGCCCTATGAGCAGcaacactacgaCAATCTCCACAAATGGATGAACCCCAAGTGGGATTTCATCGTGATGCAGGCTACCGAGCAGTACAAggctAATAAAGAGAGGAAGAAGCCAGACAGAGTGGTGTTGGACTGTCAGGAGAGAGCCTACTGGATAGTACACAGGCCACCAGTGTTGACCTTCGACGTGGTCAGGAGAACCAACATTTTCCTTACACAAGCCCTAATGAGGTCAGCTGTCAAATCGTCTATGTCCCTCACAGCCTTTGTCAAGTTCGTGACAACCCACCACAATCACGACCCGTTCCTGACAACCCCTGTCCCCAGCAACCCTTGGATAACGGACAGTGATGAGTTCTGGCAACTCAACTCAAGAAGtGTGGACATCCCCACTAAGTTGAGTGTGGAGCGTTGGGTCTTGAGCTTCTGGGAGCTGATCAGTGACCCACGAGGCAGAGTCGACTTCAAGCTCTTCCTCAAGAAGGAGCACagtgcgGAGAACATGGCGTTCTACGAGGCAGCTGAGGAGATGAGGTGGGGAGCAGCGTCTGCCATACCAGAGAAATCCCAGTTCATCTTCAAcacctTTCTGAAGCCTGGAGCTCCTCGATGGATCAACATCGATGGTCGTACCATGGGGCTGACAGTGAAGGGTCTGGTTGTTCCTCACCGCTACGTGCTGGACGCTGCCCAGACACACATCTTCCTGCTCAtgaagaaggataCCTTCTACCGGTACCTGAAGTCTCCAGTCCATAAAGACATGCAGAAGAGGGCTCTGGTCCCGGCGCCCCACGTCTTCACtgaTGCCCAGTTGGAGGCCAATGTGAGGAATCGTAACCCAGGCGTCAGCCCCATCCTGCagtggcagcaggaggaggaggagaaggcagCAGCAGCTGTTGCTGCCAGGCCCATTGACGTCAAAGCCATGGTGGCCACCAACAAGCTGGACAGGAAGTAGAGAGGGCCCAGGGCATCATGGGAAATGGAGTTTAATATACATGCAGTTGTTCATCTAATATATATTTGGTTTCCATGGAGATGGTGTTACATAGGACTACTTTATGTCCTAAATATTGGATTTATTAGCTATTGTTTTAATGGAGATATTGGTATTGTATAGAATCATTTATGTCCTCGACAACTGATGTCAAGCCAGTACGGATTGGATGATTGAGGGAAATAAACTATTGTCTGTTGAGTACCTGTGTTGCGTTAAGGACATTTACTGAACTGAGAACGAATCTGCTGATGATAAAATCTACTTTAGTTCAGATGGACAGAGAACAGGGACTGTCTGTAGGGGCCCTCTGctacacaacacacagagaacagggaCTGTCTGTAGGGGCCCTCTGCTACAcaacacactactacacaacacacagagaacagggaCTGTCTGTAGGGGCCCTCTGctacacaacacacagagaacagggaCTGTCTGTAGGGGCCCTCTGctacacaacacacagagaacagggaCTGTCTGTAGGGGCCCTCTGCTACAcaacacactactacacaacacacagagaacagggaCTGTCTGTAGGGGCCCTCTGctacacaacacacagagaacagggaCTGTCTGTAGGGGCCCTCTGctacacaacacacagagaacagggaCTGTCTGTAGGAGCCCTCTGctacacaacacacagagaacagggaCTGTCTGTAGGGGCCCTCTGCTACACAACATACTGCTACACAACACACTACTATATCAAC
>XM_036939437.1
TATGTTGGTGTCACTGTCCCACGTAACAGGTTGTTAAACCAGAGTTTAGCCGAGCTGTCATTGGTTGATAAATCCGTCCTCGCGCTTTCTGGCCCCTCTCACGCAATCTCTGACGCGCGGTCAATGGAATAAACTACTGTCCCAGCCCCGGGTATACCATTACACCTGTGTGATCACTTTTTTTCATGAACATTTCTTACCTGGATTTTCTTCTTTAGGTCCGCGTATCGACTGACCGCAAACATGACAATTAGGACGCTGAGAGATTATGGTCAGCACTACCGACCACGGATGGCATGCCTAAAAAATGTGGAGGTGTTTGTGGTTGAGATGCAGGATCCTAAGAGTGGGGTGAAGGGTGCCGACCAGAAACTCAATGTAACCATTATCCCACACGTCATCAACGGGCAGGACATTCTAGCATGGATTGTCACCAAAATGAAGGTTACCACAGAAGaGGCCCAGGCGTTTGGGACCATGCTGGTGGCCTACGGGTACATCTACCCCCTCCAGAACCACAGGAAGTTGGTCCTGGTCCCCGACAGCACCCTCTACCGCTTCCAGACCCCTTATTTCTGGCCCGTGCAGAAGTGGCCCGCTGAGGACATAGACTATGCCATCTACCTGGCCAGGAGAAACATCCGGAAGAAGGGGATGCTGGAGCCCTATGAGCAGcaacactacgaCAATCTCCACAAATGGATGAACCCCAAGTGGGATTTCATCGTGATGCAGGCTACCGAGCAGTACAAggctAATAAAGAGAGGAAGAAGCCAGACAGAGTGGTGTTGGACTGTCAGGAGAGAGCCTACTGGATAGTACACAGGCCACCACGTCGGACACACAGTGCCATGGACTATGGTCTGGACCGTCTCATTGACCCCAATGCAGAGGAGGTGTTGACCTTCGACGTGGTCAGGAGAACCAACATTTTCCTTACACAAGCCCTAATGAGGTCAGCTGTCAAATCGTCTATGTCCCTCACAGCCTTTGTCAAGTTCGTGACAACCCACCACAATCACGACCCGTTCCTGACAACCCCTGTCCCCAGCAACCCTTGGATAACGGACAGTGATGAGTTCTGGCAACTCAACTCAAGAAGtGTGGACATCCCCACTAAGTTGAGTGTGGAGCGTTGGGTCTTGAGCTTCTGGGAGCTGATCAGTGACCCACGAGGCAGAGTCGACTTCAAGCTCTTCCTCAAGAAGGAGCACagtgcgGAGAACATGGCGTTCTACGAGGCAGCTGAGGAGATGAGGTGGGGAGCAGCGTCTGCCATACCAGAGAAATCCCAGTTCATCTTCAAcacctTTCTGAAGCCTGGAGCTCCTCGATGGATCAACATCGATGGTCGTACCATGGGGCTGACAGTGAAGGGTCTGGTTGTTCCTCACCGCTACGTGCTGGACGCTGCCCAGACACACATCTTCCTGCTCAtgaagaaggataCCTTCTACCGGTACCTGAAGTCTCCAGTCCATAAAGACATGCAGAAGAGGGCTCTGGTCCCGGCGCCCCACGTCTTCACtgaTGCCCAGTTGGAGGCCAATGTGAGGAATCGTAACCCAGGCGTCAGCCCCATCCTGCagtggcagcaggaggaggaggagaaggcagCAGCAGCTGTTGCTGCCAGGCCCATTGACGTCAAAGCCATGGTGGCCACCAACAAGCTGGACAGGAAGTAGAGAGGGCCCAGGGCATCATGGGAAATGGAGTTTAATATACATGCAGTTGTTCATCTAATATATATTTGGTTTCCATGGAGATGGTGTTACATAGGACTACTTTATGTCCTAAATATTGGATTTATTAGCTATTGTTTTAATGGAGATATTGGTATTGTATAGAATCATTTATGTCCTCGACAACTGATGTCAAGCCAGTACGGATTGGATGATTGAGGGAAATAAACTATTGTCTGTTGAGTACCTGTGTTGCGTTAAGGACATTTACTGAACTGAGAACGAATCTGCTGATGATAAAATCTACTTTAGTTCAGATGGACAGAGAACAGGGACTGTCTGTAGGGGCCCTCTGctacacaacacacagagaacagggaCTGTCTGTAGGGGCCCTCTGCTACAcaacacactactacacaacacacagagaacagggaCTGTCTGTAGGGGCCCTCTGctacacaacacacagagaacagggaCTGTCTGTAGGGGCCCTCTGctacacaacacacagagaacagggaCTGTCTGTAGGGGCCCTCTGCTACAcaacacactactacacaacacacagagaacagggaCTGTCTGTAGGGGCCCTCTGctacacaacacacagagaacagggaCTGTCTGTAGGGGCCCTCTGctacacaacacacagagaacagggaCTGTCTGTAGGAGCCCTCTGctacacaacacacagagaacagggaCTGTCTGTAGGGGCCCTCTGCTACACAACATACTGCTACACAACACACTACTATATCAA

Function

NR:

description
PREDICTED: regulator of G-protein signaling 9 isoform X1

GO:

id name namespace
GO:0038032 termination of G protein-coupled receptor signaling pathway biological_process
GO:0035556 intracellular signal transduction biological_process
GO:0005834 heterotrimeric G-protein complex cellular_component
GO:0004871 obsolete signal transducer activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036939438.1 False 2414 mRNA 0.51 16 98187732 98218285
XM_036939437.1 True 2470 mRNA 0.51 17 98187738 98218284

Neighbor

gene id symbol gene type direction distance location
LOC118937837 LOC106594247 coding upstream 65654 98101643 ~ 98122078 (+)
LOC110485325 LOC105012794 coding upstream 97359 98065664 ~ 98090718 (+)
LOC110487112 LOC106594630 coding upstream 128281 98022211 ~ 98059451 (+)
LOC118937811 LOC106606197 coding upstream 170562 98003597 ~ 98017170 (+)
LOC118937810 dus1l coding upstream 272250 97894374 ~ 97915482 (+)
LOC118936514 smim22 coding downstream 41285 98259570 ~ 98268855 (+)
LOC110487124 LOC105006040 coding downstream 207475 98425760 ~ 98564239 (+)
LOC110516605 LOC106592968 coding downstream 758048 98976333 ~ 98977246 (+)
LOC110539183 LOC106606365 coding downstream 852711 99070996 ~ 99088300 (+)
epn3a LOC105006167 coding downstream 899116 99117401 ~ 99175955 (+)
G1131508 NA non-coding upstream 47411 98137923 ~ 98140321 (+)
G1131518 NA non-coding upstream 53382 98134151 ~ 98134350 (+)
G1131510 NA non-coding upstream 63684 98090990 ~ 98124048 (+)
G1131557 NA non-coding downstream 1468 98219753 ~ 98225599 (+)
G1131560 NA non-coding downstream 11856 98230141 ~ 98231090 (+)
G1131565 cog1 non-coding downstream 22463 98240748 ~ 98241565 (+)
G1131567 cog1 non-coding downstream 29812 98248097 ~ 98252334 (+)
G1131569 NA non-coding downstream 31998 98250283 ~ 98251210 (+)
G1131438 NA other upstream 365675 97820724 ~ 97822057 (+)
G1130780 LOC106606334 other upstream 1024653 97162262 ~ 97163079 (+)
LOC118937804 LOC106591169 other upstream 1485795 96676774 ~ 96702725 (+)
G1130570 alg1 other upstream 1554280 96618256 ~ 96633452 (+)
LOC110538761 LOC106606716 other upstream 2557157 95629494 ~ 95815227 (+)
G1132060 NA other downstream 506572 98724857 ~ 98725197 (+)
G1132058 NA other downstream 545674 98762440 ~ 98767257 (+)
G1132082 NA other downstream 563854 98782139 ~ 98783327 (+)
G1132093 NA other downstream 577473 98795758 ~ 98797512 (+)

Expression


Co-expression Network