Gene
RNA
| Item | Value |
|---|---|
| gene id | epn3a |
| gene name | LOC105006167 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 99117401 ~ 99175955 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| epsin-3-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_036939478.1 | False | 4321 | mRNA | 0.52 | 13 | 99117401 | 99175955 |
| XM_036939476.1 | False | 4494 | mRNA | 0.52 | 14 | 99117402 | 99175955 |
| XM_036939477.1 | False | 4416 | mRNA | 0.52 | 13 | 99117402 | 99175955 |
| TU1288993 | True | 757 | TUCP | 0.59 | 6 | 99127617 | 99151314 |
99,070,000
99,080,000
99,090,000
99,100,000
99,110,000
99,120,000
99,130,000
99,140,000
99,150,000
99,160,000
99,170,000
99,180,000
NC_048576.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110539183 | LOC106606365 | coding | upstream | 29101 | 99070996 ~ 99088300 (+) |
| LOC110516605 | LOC106592968 | coding | upstream | 140155 | 98976333 ~ 98977246 (+) |
| LOC110487124 | LOC105006040 | coding | upstream | 553162 | 98425760 ~ 98564239 (+) |
| LOC118936514 | smim22 | coding | upstream | 851374 | 98259570 ~ 98268855 (+) |
| LOC110516721 | LOC105012791 | coding | upstream | 899116 | 98187732 ~ 98218285 (+) |
| LOC110538843 | LOC106601911 | coding | downstream | 7162 | 99183117 ~ 99188055 (+) |
| LOC110538844 | tbcd | coding | downstream | 12930 | 99188885 ~ 99322871 (+) |
| LOC110485297 | LOC106592354 | coding | downstream | 519651 | 99695572 ~ 99698337 (+) |
| LOC118937855 | LOC106592355 | coding | downstream | 531850 | 99707805 ~ 99709282 (+) |
| LOC118937865 | LOC106601187 | coding | downstream | 552668 | 99728623 ~ 99751831 (+) |
| G1132391 | NA | non-coding | upstream | 17361 | 99099729 ~ 99100040 (+) |
| G1132387 | NA | non-coding | upstream | 24357 | 99092828 ~ 99093044 (+) |
| G1132365 | NA | non-coding | upstream | 28063 | 99088837 ~ 99089338 (+) |
| G1132369 | NA | non-coding | upstream | 41051 | 99076123 ~ 99076350 (+) |
| G1132444 | NA | non-coding | downstream | 79647 | 99255602 ~ 99256720 (+) |
| G1132445 | NA | non-coding | downstream | 82284 | 99258239 ~ 99293689 (+) |
| G1132448 | NA | non-coding | downstream | 84427 | 99260382 ~ 99260798 (+) |
| G1132453 | NA | non-coding | downstream | 129710 | 99305665 ~ 99306138 (+) |
| G1132458 | NA | non-coding | downstream | 150505 | 99326460 ~ 99326924 (+) |
| G1132187 | NA | other | upstream | 115628 | 99001356 ~ 99001773 (+) |
| G1132174 | NA | other | upstream | 142475 | 98974443 ~ 98974926 (+) |
| G1132093 | NA | other | upstream | 319889 | 98795758 ~ 98797512 (+) |
| G1132082 | NA | other | upstream | 334074 | 98782139 ~ 98783327 (+) |
| LOC110513175 | LOC106603827 | other | downstream | 629079 | 99805034 ~ 99817184 (+) |
| G1132887 | NA | other | downstream | 833808 | 100009763 ~ 100011513 (+) |
| G1133209 | NA | other | downstream | 1299914 | 100475869 ~ 100476859 (+) |
| G1132397 | NA | non-coding | upstream | 6608 | 99120807 ~ 99121009 (+) |
| G1132415 | NA | non-coding | downstream | 994 | 99152308 ~ 99152731 (+) |
| G1132417 | NA | non-coding | downstream | 6798 | 99158112 ~ 99158786 (+) |
| G1132424 | NA | non-coding | downstream | 14109 | 99165423 ~ 99165719 (+) |
| G1132425 | NA | non-coding | downstream | 15045 | 99166359 ~ 99166634 (+) |
