LOC118937853 (tmem114)


Basic Information

Item Value
gene id LOC118937853
gene name tmem114
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 100258230 ~ 100295591 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036939630.1
tctcgctctgaTTTGCCTCACCAGGtctatcactctctctgtttctctctctcctctctcctctcctcttctcggGTATGGTGAGGATGACTCTGGGAGCTCTGGCACTGTTTGTAGCAGTGTGTGGAGTGTCCAGTTTTGTGTTGCTGGGGGTGGCCATAGGGACAGACTACTGGTACCTGATAGATGTCGCTCAGAGGGAAAAcatctccaacctctctctcaactcaCACTCAGGACTGTGGAGGACCTGCAACTCCCAGAAGCTCTGTCAGCCATTCGTCAACCCGTTTGAAGGCGGACAAAACGTCACAGACTCTTACAGACAACTTTTAAataTGCACGGGACATTCATGGTGTTGCTTCCTCTCAGCATGATCATCATGGTTGTCGGGGGACTGATGGGGTTCATCGGCCTGCTGGCCAGAGCTTACctactactgctgatgactgGTGTACTGTTACTACTGGGAGctctgTCCTCACTAACAGGGGTGAGTGTGTACATGGCCTACTCTGCTGCAGTCTTCCAGGAGGCTCTGTGTCTGGCTGAGCAGATGGGGGTCAATATGGAGGGGGTCCAGATCCTGTTTGGCTGGTCTCTGGTCCTGTCCTGGATCTCTAGTGGAACACAGCTATTCACCTCTGCTGGCTTCCTGCTGGCCTGCAGAACCATcactacacagagacaggaactgaAATTatgagacatggagggagggggagagagaggaggagagagagggaggaggcttCCTGCTGGCCTGCAGAACCATcactacacagagacaggaactgaAATTatgagacatggagggagggggagagagaggaggagagagagggaggaggcttCCTGCTGGCCTGCAGAACCATcactacacagagacaggaactgaACTTATGcgacatggagggagggggagagagaaggagcgagagaagcaggaggaggagagagagggaggaggagagagagggaggaggcttCCTGCTGGCCTGCAGAACCATcactacacagagacaggaactgaAATTatgagacatggagggagggggagagagagggagcgagagaagcaggaggaggagagagagggaggaggagag
>TU1291344
tctatcactctctctgtttctctctctcctctctcctctcctcttctcggGTATGGTGAGGATGACTCTGGGAGCTCTGGCACTGTTTGTAGCAGTGTGTGGAGTGTCCAGTTTTGTGTTGCTGGGGGTGGCCATAGGGACAGACTACTGGTACCTGATAGATGTCGCTCAGAGGGAAAAcatctccaacctctctctcaactcaCACTCAGGACTGTGGAGGACCTGCAACTCCCAGAAGCTCTGTCAGCCATTCGTCAACCCGTTTGAAGGCGGACAAAACGTCACAGACTCTTACAGACAACTTTTAAataTGCACGGGACATTCATGGTGTTGCTTCCTCTCAGCATGATCATCATGGTTGTCGGGGGACTGATGGGGTTCATCGGCCTGCTGGCCAGAGCTTACctactactgctgatgactgGTGTACTGTTACTACTGGGAGctctgTCCTCACTAACAGGGGTGAGTGTGTACATGGCCTACTCTGCTGCAGTCTTCCAGGAGGCTCTGTGTCTGGCTGAGCAGATGGGGGTCAATATGGAGGGGGTCCAGATCCTGTTTGGCTGGTCTCTGGTCCTGTCCTGGATCTCTAGTGGAACACAGCTATTCACCTCTGCTGGCTTCCTGCTGGCCTGCAGAACCATcactacacag

Function

symbol description
tmem114 Predicted to be located in apicolateral plasma membrane. Predicted to be integral component of membrane. Predicted to be active in apical plasma membrane.

NR:

description
transmembrane protein 114

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036939630.1 False 1110 mRNA 0.54 4 100258230 100295591
TU1291344 True 661 TUCP 0.53 4 100258654 100295566

Neighbor

gene id symbol gene type direction distance location
LOC110539073 LOC106606306 coding downstream 272325 99969674 ~ 99985905 (-)
LOC118937866 NA coding downstream 289767 99966423 ~ 99968463 (-)
LOC110539071 LOC106602020 coding downstream 292983 99946736 ~ 99965247 (-)
LOC110538873 NA coding downstream 400974 99850156 ~ 99857256 (-)
LOC110485298 LOC106603827 coding downstream 585592 99639639 ~ 99672638 (-)
carhsp1 LOC106592621 coding upstream 138660 100434251 ~ 100462726 (-)
nat15 natu coding upstream 177963 100473554 ~ 100499497 (-)
LOC118937869 NA coding upstream 195064 100490607 ~ 100491915 (-)
eci1 LOC106596253 coding upstream 234593 100530184 ~ 100543453 (-)
c12h16orf72 LOC106606270 coding upstream 253596 100549187 ~ 100558850 (-)
G1134073 NA non-coding downstream 5487 100248741 ~ 100252743 (-)
G1134072 NA non-coding downstream 5999 100248302 ~ 100252231 (-)
G1134052 NA non-coding downstream 52496 100205326 ~ 100205734 (-)
G1134050 NA non-coding downstream 60248 100196958 ~ 100197982 (-)
G1134048 NA non-coding downstream 62009 100194261 ~ 100196221 (-)
G1134106 mettl22 non-coding upstream 23045 100318636 ~ 100330277 (-)
G1134110 NA non-coding upstream 30832 100326423 ~ 100328120 (-)
G1134129 NA non-coding upstream 31941 100327532 ~ 100328040 (-)
G1134133 NA non-coding upstream 48092 100343683 ~ 100345668 (-)
G1134135 NA non-coding upstream 50167 100345758 ~ 100346436 (-)
G1134054 NA other downstream 47082 100210457 ~ 100211148 (-)
G1133028 NA other downstream 333104 99924060 ~ 99925126 (-)
G1132625 NA other downstream 931306 99326512 ~ 99326924 (-)
LOC110538845 LOC106606260 other downstream 1075315 99178086 ~ 99183106 (-)
G1132569 LOC106606209 other downstream 1082322 99173665 ~ 99177478 (-)
G1134117 NA other upstream 125366 100420957 ~ 100423066 (-)
G1134183 NA other upstream 208014 100503605 ~ 100504088 (-)
LOC118937858 LOC106591175 other upstream 332852 100628440 ~ 100651699 (-)
LOC118937873 LOC106603827 other upstream 521681 100816544 ~ 100821913 (-)

Expression


Co-expression Network