LOC118937870


Basic Information

Item Value
gene id LOC118937870
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 102028055 ~ 102099442 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005035285.1
aagacacagagacagcaacagaagaataggatatGACGGAGAGAGACACcaaacaagacacagagacagcaacagaagaataggatatgatggagagagacaccagacaagacacagagacagcaacagaataataggatgtgatggagagagacaccagacaagacacagagacagcaacagaggacacagagaaagtgatggggagagacagaagaatagagttccagacagttgtagaatgtatGCCAAGACACATTGTAAGAgctataaagagagagggagtgggagagaaaacAGGCAGAACCTGATATGTAAATGAGGAGAGCAAATGAAACTAACTTTTGACGACCTGATGATCATCCAGACTCTGTTTCTATTGAGAGATAAAAGGCTGGTTGAATGAGTTGTCTATGAAAGCTACTTCATCTGTAAGAAAACAGGCGTCTGCACCAGTGACTGCTGGTTGAATGAGTTGTCTATGAAAGCTACTTCATCTGTGAGAAAACAGGCGTCTGCACCAGTGACTGTAAGTTATGTGATTTCCTCATGTGAAATTAAAAATGTGTTTGTAGCCTACGCAGTTATAAAATGGCTGTTGAAACTGTGACACATATTTCTCAGGACATTAGAAGTCAGATAAATGTATTGAGACGTAGGAAAGATGGGCAAACTCTCGTTGGTCTTGGCTTTCTACACACTATTATAAGGTTAGTTGATGTTAGACATTCAATAGTCAGAGTAGGTTTGAGTTATGATCACTTATCATGCTGACAAACCTGATGGTCTCtgtgaactgatctgaacaggt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005035285.1 True 811 mRNA 0.41 3 102028055 102099442

Neighbor

gene id symbol gene type direction distance location
LOC110516333 LOC106603753 coding downstream 73584 101763112 ~ 101954471 (-)
LOC110512533 LOC106603753 coding downstream 175879 101820763 ~ 101852176 (-)
LOC118937861 LOC106603827 coding downstream 218603 101808885 ~ 101809452 (-)
LOC118937854 LOC106603827 coding downstream 343743 101682498 ~ 101684312 (-)
LOC118937846 LOC106592354 coding downstream 521717 101495095 ~ 101509022 (-)
LOC118937612 LOC106593326 coding upstream 17163 102116605 ~ 102232078 (-)
LOC118937843 LOC106601187 coding upstream 142671 102236650 ~ 102545195 (-)
LOC118937850 NA coding upstream 329680 102429122 ~ 102444659 (-)
LOC118937613 LOC106603753 coding upstream 385327 102484769 ~ 102536330 (-)
LOC118937849 LOC106593326 coding upstream 544267 102643709 ~ 102646059 (-)
G1134622 NA non-coding downstream 8405 102018233 ~ 102019650 (-)
G1134575 NA non-coding downstream 25809 102001150 ~ 102002246 (-)
G1134618 NA non-coding downstream 26955 101996751 ~ 102001100 (-)
G1134354 LOC106603827 non-coding downstream 37524 101986448 ~ 101990531 (-)
G1134357 NA non-coding downstream 37824 101926106 ~ 101990231 (-)
G1134290 NA non-coding upstream 5781 102105223 ~ 102106343 (-)
G1134285 LOC106603827 non-coding upstream 12570 102112012 ~ 102115927 (-)
G1134646 NA non-coding upstream 20536 102119978 ~ 102155836 (-)
G1134648 NA non-coding upstream 45867 102145309 ~ 102164325 (-)
G1134652 NA non-coding upstream 67671 102167113 ~ 102170712 (-)
G1134612 NA other downstream 52049 101974649 ~ 101976006 (-)
G1134287 LOC106592354 other downstream 73612 101437772 ~ 101954443 (-)
G1134303 LOC106601187 other downstream 264802 101756130 ~ 101817671 (-)
G1134515 NA other downstream 433611 101536397 ~ 101594444 (-)
G1134325 NA other upstream 133596 102233038 ~ 102233671 (-)
G1134301 NA other upstream 135647 102235089 ~ 102236521 (-)
G1134299 LOC106581592 other upstream 264693 102364135 ~ 102366535 (-)
G1134329 NA other upstream 267657 102367099 ~ 102375142 (-)

Expression


Co-expression Network