Gene
RNA
| Item | Value |
|---|---|
| gene id | G1028466 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 1317341 ~ 1323390 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein LOC111231693 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1170879 | True | 273 | lncRNA | 0.30 | 2 | 1317341 | 1323390 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110536893 | txnl1 | coding | upstream | 372155 | 917211 ~ 945186 (+) |
| katnal2 | katnal2 | coding | upstream | 956890 | 339376 ~ 360451 (+) |
| sigmar1 | sigmar1 | coding | upstream | 981745 | 324934 ~ 335596 (+) |
| cntfr | cntfr | coding | downstream | 1209194 | 2532584 ~ 3047731 (+) |
| LOC118937614 | NA | coding | downstream | 1363438 | 2686828 ~ 2716994 (+) |
| il11ra | LOC106568611 | coding | downstream | 1772144 | 3095534 ~ 3206784 (+) |
| LOC118937617 | NA | coding | downstream | 2298006 | 3621059 ~ 3622127 (+) |
| LOC110536763 | LOC106572512 | coding | downstream | 2812930 | 4136320 ~ 4226240 (+) |
| G1028464 | NA | non-coding | upstream | 106 | 1315793 ~ 1317235 (+) |
| G1028461 | NA | non-coding | upstream | 9429 | 1306517 ~ 1307912 (+) |
| G1028443 | NA | non-coding | upstream | 40836 | 1275864 ~ 1276505 (+) |
| G1028442 | NA | non-coding | upstream | 41553 | 1274163 ~ 1275788 (+) |
| G1028439 | NA | non-coding | upstream | 46005 | 1270266 ~ 1271336 (+) |
| G1028480 | NA | non-coding | downstream | 54881 | 1378271 ~ 1380195 (+) |
| G1028494 | NA | non-coding | downstream | 97304 | 1420694 ~ 1421788 (+) |
| G1028517 | NA | non-coding | downstream | 150163 | 1473553 ~ 1474021 (+) |
| G1028527 | NA | non-coding | downstream | 168763 | 1492153 ~ 1492901 (+) |
| G1028530 | NA | non-coding | downstream | 172366 | 1495756 ~ 1499419 (+) |
| G1028416 | NA | other | upstream | 91943 | 1224701 ~ 1225398 (+) |
| G1028361 | NA | other | upstream | 209615 | 1107151 ~ 1107726 (+) |
| G1028327 | NA | other | upstream | 318705 | 998270 ~ 998636 (+) |
| G1028240 | LOC106568532 | other | upstream | 423579 | 881163 ~ 893762 (+) |
| G1028184 | NA | other | upstream | 536481 | 758922 ~ 780860 (+) |
| G1028508 | NA | other | downstream | 135957 | 1459347 ~ 1459903 (+) |
| G1028513 | NA | other | downstream | 145185 | 1468575 ~ 1469776 (+) |
| G1028515 | NA | other | downstream | 146460 | 1469850 ~ 1470695 (+) |
| LOC110517257 | tcf4 | other | downstream | 153321 | 1152988 ~ 1562821 (+) |
| G1028573 | NA | other | downstream | 389141 | 1712531 ~ 1714574 (+) |
