Gene
RNA
| Item | Value |
|---|---|
| gene id | G1028508 |
| gene name | NA |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 1459347 ~ 1459903 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106591269 isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1170931 | True | 497 | TUCP | 0.44 | 2 | 1459347 | 1459903 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110536893 | txnl1 | coding | upstream | 514161 | 917211 ~ 945186 (+) |
| katnal2 | katnal2 | coding | upstream | 1098896 | 339376 ~ 360451 (+) |
| sigmar1 | sigmar1 | coding | upstream | 1123751 | 324934 ~ 335596 (+) |
| cntfr | cntfr | coding | downstream | 1072681 | 2532584 ~ 3047731 (+) |
| LOC118937614 | NA | coding | downstream | 1226925 | 2686828 ~ 2716994 (+) |
| il11ra | LOC106568611 | coding | downstream | 1635631 | 3095534 ~ 3206784 (+) |
| LOC118937617 | NA | coding | downstream | 2161493 | 3621059 ~ 3622127 (+) |
| LOC110536763 | LOC106572512 | coding | downstream | 2676417 | 4136320 ~ 4226240 (+) |
| G1028494 | NA | non-coding | upstream | 37559 | 1420694 ~ 1421788 (+) |
| G1028480 | NA | non-coding | upstream | 79152 | 1378271 ~ 1380195 (+) |
| G1028459 | NA | non-coding | upstream | 105750 | 1304335 ~ 1353597 (+) |
| G1028467 | NA | non-coding | upstream | 119384 | 1318900 ~ 1339963 (+) |
| G1028466 | NA | non-coding | upstream | 135957 | 1317341 ~ 1323390 (+) |
| G1028517 | NA | non-coding | downstream | 13650 | 1473553 ~ 1474021 (+) |
| G1028527 | NA | non-coding | downstream | 32250 | 1492153 ~ 1492901 (+) |
| G1028530 | NA | non-coding | downstream | 35853 | 1495756 ~ 1499419 (+) |
| G1028532 | NA | non-coding | downstream | 43789 | 1503692 ~ 1504471 (+) |
| G1028541 | NA | non-coding | downstream | 81369 | 1541272 ~ 1545254 (+) |
| G1028416 | NA | other | upstream | 233949 | 1224701 ~ 1225398 (+) |
| G1028361 | NA | other | upstream | 351621 | 1107151 ~ 1107726 (+) |
| G1028327 | NA | other | upstream | 460711 | 998270 ~ 998636 (+) |
| G1028240 | LOC106568532 | other | upstream | 565585 | 881163 ~ 893762 (+) |
| G1028513 | NA | other | downstream | 8672 | 1468575 ~ 1469776 (+) |
| G1028515 | NA | other | downstream | 9947 | 1469850 ~ 1470695 (+) |
| LOC110517257 | tcf4 | other | downstream | 16808 | 1152988 ~ 1562821 (+) |
| G1028573 | NA | other | downstream | 252628 | 1712531 ~ 1714574 (+) |
| G1029035 | NA | other | downstream | 427244 | 1887147 ~ 1887594 (+) |
