G1028515


Basic Information

Item Value
gene id G1028515
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 1469850 ~ 1470695 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1170941
ATGTtatggtggttccaagttctctTATGGTGCTTCCAAGTTCTATTTttgtggttccaagttctattatgTTTGTTCAAAGTTCTATTATGGTGGTTCCAAATTCTATtatggtggttccaagttctattgtggtggttccaagttctattgtgatGGTTCCAAGTactattgtggtggttccaagttctattgtgatggttccaagttatattatggtggttccaagttctattttggtggttccaagttctattatggtggttccaagttctattgtggtggttccagGTTCTATTTTGGTGGTTCCATGTTCTATTGTGATAGTTCCAAGTTCTACTGTgatggttccaagttctattgttaTGGTTCCAAGTtttattgtggtggttccaagttctattgtgatggttccaagttctattttGGTGGTTCCAAGGTCTAtgttggtggttccaagttctattgtggtggttccaagttctattatggtggttccaagttctattgtggtggttccaagttctattgtggtggttccaagttctatatTGGTGGTTCCACGTTCTAttttggtggttccaagttctattgtgatGGTTCCAAGTTTGATTGTGGTAGTTCCAAGTTCTATTATGGTGGTTACAAGTTCTATCATTGTGGTTCCATGTTATTTtatggtggttccaagttctattgtggtggttccagGTTCTATtatggtggttccaagttctattgtgatAGTTCCAAGTTCTactgtggtggttccaagttctattgtgatGGTTCCAAGTtttattg

Function

NR:

description
PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1170941 True 804 TUCP 0.39 2 1469850 1470695
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110536893 txnl1 coding upstream 524664 917211 ~ 945186 (+)
katnal2 katnal2 coding upstream 1109399 339376 ~ 360451 (+)
sigmar1 sigmar1 coding upstream 1134254 324934 ~ 335596 (+)
cntfr cntfr coding downstream 1061889 2532584 ~ 3047731 (+)
LOC118937614 NA coding downstream 1216133 2686828 ~ 2716994 (+)
il11ra LOC106568611 coding downstream 1624839 3095534 ~ 3206784 (+)
LOC118937617 NA coding downstream 2150701 3621059 ~ 3622127 (+)
LOC110536763 LOC106572512 coding downstream 2665625 4136320 ~ 4226240 (+)
G1028494 NA non-coding upstream 48062 1420694 ~ 1421788 (+)
G1028480 NA non-coding upstream 89655 1378271 ~ 1380195 (+)
G1028467 NA non-coding upstream 129887 1318900 ~ 1339963 (+)
G1028466 NA non-coding upstream 146460 1317341 ~ 1323390 (+)
G1028464 NA non-coding upstream 152615 1315793 ~ 1317235 (+)
G1028517 NA non-coding downstream 2858 1473553 ~ 1474021 (+)
G1028527 NA non-coding downstream 21458 1492153 ~ 1492901 (+)
G1028530 NA non-coding downstream 25061 1495756 ~ 1499419 (+)
G1028532 NA non-coding downstream 32997 1503692 ~ 1504471 (+)
G1028541 NA non-coding downstream 70577 1541272 ~ 1545254 (+)
G1028513 NA other upstream 74 1468575 ~ 1469776 (+)
G1028508 NA other upstream 9947 1459347 ~ 1459903 (+)
G1028459 NA other upstream 116253 1304335 ~ 1353597 (+)
G1028416 NA other upstream 244452 1224701 ~ 1225398 (+)
G1028361 NA other upstream 362124 1107151 ~ 1107726 (+)
LOC110517257 tcf4 other downstream 6016 1152988 ~ 1562821 (+)
G1028573 NA other downstream 241836 1712531 ~ 1714574 (+)
G1029035 NA other downstream 416452 1887147 ~ 1887594 (+)
G1029386 NA other downstream 972836 2443531 ~ 2444497 (+)
G1029570 NA other downstream 1199209 2669904 ~ 2670507 (+)

Expression

G1028515 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 5.
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G1028515 Expression in each Bioproject

Bar chart with 17 bars.
G1028515 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 100.
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Co-expression Network