Gene
RNA
| Item | Value |
|---|---|
| gene id | G1028983 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 1827102 ~ 1827391 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1171556 | True | 290 | lncRNA | 0.37 | 1 | 1827102 | 1827391 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110536897 | st8sia3 | coding | downstream | 88330 | 1715888 ~ 1738772 (-) |
| LOC110536895 | onecut2 | coding | downstream | 139790 | 1643531 ~ 1687312 (-) |
| LOC110536774 | LOC106568532 | coding | downstream | 922947 | 881157 ~ 904155 (-) |
| skor2 | skor2 | coding | downstream | 1331824 | 412033 ~ 495278 (-) |
| hdhd2 | hdhd2 | coding | downstream | 1429396 | 363260 ~ 397706 (-) |
| LOC110536852 | NA | coding | upstream | 1394951 | 3220981 ~ 3224813 (-) |
| tmem267 | tmem267 | coding | upstream | 1397572 | 3224963 ~ 3228069 (-) |
| LOC118937615 | NA | coding | upstream | 1406702 | 3234093 ~ 3243673 (-) |
| LOC110536854 | LOC106568607 | coding | upstream | 1540678 | 3368069 ~ 3452498 (-) |
| LOC110536759 | epha5 | coding | upstream | 1756684 | 3584075 ~ 3764712 (-) |
| G1028976 | NA | non-coding | downstream | 13737 | 1811579 ~ 1813365 (-) |
| G1028970 | NA | non-coding | downstream | 31869 | 1794773 ~ 1795233 (-) |
| G1028969 | NA | non-coding | downstream | 32672 | 1794138 ~ 1794430 (-) |
| G1028855 | NA | non-coding | downstream | 112711 | 1711409 ~ 1714391 (-) |
| G1028854 | NA | non-coding | downstream | 194014 | 1628890 ~ 1633088 (-) |
| G1028990 | NA | non-coding | upstream | 28457 | 1855848 ~ 1856105 (-) |
| G1029003 | NA | non-coding | upstream | 38744 | 1866135 ~ 1868161 (-) |
| G1029010 | NA | non-coding | upstream | 47587 | 1874978 ~ 1875364 (-) |
| G1029017 | NA | non-coding | upstream | 50954 | 1878345 ~ 1878771 (-) |
| G1029023 | NA | non-coding | upstream | 52745 | 1880136 ~ 1880521 (-) |
| G1030014 | NA | other | upstream | 1079436 | 2906827 ~ 2907251 (-) |
| G1031093 | LOC106572512 | other | upstream | 2342895 | 4170286 ~ 4178074 (-) |
| G1031855 | NA | other | upstream | 2970056 | 4797447 ~ 4802891 (-) |
| G1031871 | slc46a2 | other | upstream | 3002979 | 4830370 ~ 4831454 (-) |
| G1032158 | NA | other | upstream | 3708090 | 5535481 ~ 5537612 (-) |
