Gene
RNA
| Item | Value |
|---|---|
| gene id | G1029533 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 2617517 ~ 2617919 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1172318 | True | 303 | lncRNA | 0.53 | 2 | 2617517 | 2617919 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110517257 | tcf4 | coding | upstream | 1054696 | 1152988 ~ 1562821 (+) |
| LOC110536893 | txnl1 | coding | upstream | 1672331 | 917211 ~ 945186 (+) |
| katnal2 | katnal2 | coding | upstream | 2257066 | 339376 ~ 360451 (+) |
| sigmar1 | sigmar1 | coding | upstream | 2281921 | 324934 ~ 335596 (+) |
| LOC118937614 | NA | coding | downstream | 68909 | 2686828 ~ 2716994 (+) |
| il11ra | LOC106568611 | coding | downstream | 477615 | 3095534 ~ 3206784 (+) |
| LOC118937617 | NA | coding | downstream | 1003477 | 3621059 ~ 3622127 (+) |
| LOC110536763 | LOC106572512 | coding | downstream | 1518401 | 4136320 ~ 4226240 (+) |
| LOC118937874 | NA | coding | downstream | 1950166 | 4568083 ~ 4569025 (+) |
| G1029521 | NA | non-coding | upstream | 20257 | 2596834 ~ 2597260 (+) |
| G1029499 | NA | non-coding | upstream | 54466 | 2562717 ~ 2563051 (+) |
| G1029492 | NA | non-coding | upstream | 59884 | 2553388 ~ 2557633 (+) |
| G1029466 | NA | non-coding | upstream | 103362 | 2513922 ~ 2514155 (+) |
| G1029453 | NA | non-coding | upstream | 116124 | 2500786 ~ 2501393 (+) |
| G1029565 | NA | non-coding | downstream | 47219 | 2665138 ~ 2665519 (+) |
| G1029607 | NA | non-coding | downstream | 118945 | 2736864 ~ 2738913 (+) |
| G1029609 | NA | non-coding | downstream | 126237 | 2744156 ~ 2780013 (+) |
| G1029586 | NA | non-coding | downstream | 165598 | 2783517 ~ 2786006 (+) |
| G1029627 | NA | non-coding | downstream | 184747 | 2802666 ~ 2803265 (+) |
| G1029386 | NA | other | upstream | 173020 | 2443531 ~ 2444497 (+) |
| G1029035 | NA | other | upstream | 729923 | 1887147 ~ 1887594 (+) |
| G1028573 | NA | other | upstream | 902943 | 1712531 ~ 1714574 (+) |
| G1028515 | NA | other | upstream | 1146822 | 1469850 ~ 1470695 (+) |
| G1029570 | NA | other | downstream | 51985 | 2669904 ~ 2670507 (+) |
| G1029628 | NA | other | downstream | 185570 | 2803489 ~ 2804024 (+) |
| G1030609 | NA | other | downstream | 1204182 | 3822101 ~ 3822569 (+) |
| G1031335 | NA | other | downstream | 2057587 | 4675506 ~ 4677242 (+) |
