Gene
RNA
| Item | Value |
|---|---|
| gene id | G1029607 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 2736864 ~ 2738913 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1172415 | True | 530 | lncRNA | 0.39 | 2 | 2736864 | 2738913 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118937614 | NA | coding | upstream | 19870 | 2686828 ~ 2716994 (+) |
| LOC110517257 | tcf4 | coding | upstream | 1174043 | 1152988 ~ 1562821 (+) |
| LOC110536893 | txnl1 | coding | upstream | 1791678 | 917211 ~ 945186 (+) |
| katnal2 | katnal2 | coding | upstream | 2376413 | 339376 ~ 360451 (+) |
| sigmar1 | sigmar1 | coding | upstream | 2401268 | 324934 ~ 335596 (+) |
| il11ra | LOC106568611 | coding | downstream | 356621 | 3095534 ~ 3206784 (+) |
| LOC118937617 | NA | coding | downstream | 882483 | 3621059 ~ 3622127 (+) |
| LOC110536763 | LOC106572512 | coding | downstream | 1397407 | 4136320 ~ 4226240 (+) |
| LOC118937874 | NA | coding | downstream | 1829172 | 4568083 ~ 4569025 (+) |
| LOC110536864 | LOC106568580 | coding | downstream | 1839540 | 4578453 ~ 4797837 (+) |
| G1029565 | NA | non-coding | upstream | 71345 | 2665138 ~ 2665519 (+) |
| G1029533 | NA | non-coding | upstream | 118945 | 2617517 ~ 2617919 (+) |
| G1029521 | NA | non-coding | upstream | 139604 | 2596834 ~ 2597260 (+) |
| G1029499 | NA | non-coding | upstream | 173813 | 2562717 ~ 2563051 (+) |
| G1029492 | NA | non-coding | upstream | 179231 | 2553388 ~ 2557633 (+) |
| G1029609 | NA | non-coding | downstream | 5243 | 2744156 ~ 2780013 (+) |
| G1029586 | NA | non-coding | downstream | 44604 | 2783517 ~ 2786006 (+) |
| G1029627 | NA | non-coding | downstream | 63753 | 2802666 ~ 2803265 (+) |
| G1029629 | NA | non-coding | downstream | 66230 | 2805143 ~ 2805845 (+) |
| G1029637 | NA | non-coding | downstream | 78055 | 2816968 ~ 2818816 (+) |
| G1029570 | NA | other | upstream | 66357 | 2669904 ~ 2670507 (+) |
| G1029386 | NA | other | upstream | 292367 | 2443531 ~ 2444497 (+) |
| G1029035 | NA | other | upstream | 849270 | 1887147 ~ 1887594 (+) |
| G1028573 | NA | other | upstream | 1022290 | 1712531 ~ 1714574 (+) |
| G1029628 | NA | other | downstream | 64576 | 2803489 ~ 2804024 (+) |
| G1030609 | NA | other | downstream | 1083188 | 3822101 ~ 3822569 (+) |
| G1031335 | NA | other | downstream | 1936593 | 4675506 ~ 4677242 (+) |
| LOC110536873 | inip | other | downstream | 2178630 | 4917485 ~ 4965917 (+) |
