G1029586


Basic Information

Item Value
gene id G1029586
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 2783517 ~ 2786006 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1172382
CTTCAGGAGGGCGTCTTATGTTCACGTTATCGGTCCCATGTTCAGTTTGGGTGGTGACGTGACCGTGCAGTGTGTTGTAGCAACAGCGTAGTAACTGTGTTGTGACTGTGTAGTAACAGTGTAGTAACAGCGTAATGACCTCATAGTAACAGGGTAGTAACAGTCTAGTAACAGCGTATTAACAGGGTAGTAACAGCGTAGTAACGGTGTTGTAACTGTGTAGTAACAGCGTAGTAACAGCGTAATAACAGCGTAATAACAGCGTAGTAAAAGGGTGGTAACTGTGTAGTAACAGCGTAATAACAGCGTAATAACAGCGTAGTACCagggtggtaaatgtctagtaACAGTGTAGTAACAGCGTAATAACAGCGTAATAACAGCGTAGTACCAGGGTGGTAAATGTGTAGTAACAGTGTAGTAACGCCGTACTGACTTTGTAGTAACAGCGTAGTGACTGTGTAGTAACAGCGTAGTAACAGCATAGTAACAGCTTAGAAACTGTGAAGTAACAGTGTAATAACAGTGTAGTAACAGTGTAGTAACAGCGTAGTGACTGTGTAGTAACAGCGAGTGACTGTGTAGTAACAGCGTAGTAACAGCATAGTAACAGCTTAGAAACTGTGTAGTAACAGTGTAATAACAGTGTAGTAACAGTGTAGTAACAGCATAGTGACTGTGTAGTAACAGCGAGTGACTGTGTATTAGCAGCTTAGTAACAGCATAGTAACAGTGTAGTAACAGCGTAGTAACAGCGTAGTGACTGTGTGGTAACAGCGTAGTGACTGTGTAGTAACAACGTAGTGACTGCGTAATAACAGCGTAGTAACAGTGTAGTAACAGCGTAATAACAGGGTAGTAACAGCATAGTAACAGCGTAGGAACAGGGTAGTAACACTGTAGTAAACGCACAATAACAGTGTAGTAACAGTGTAGTAACAGTGTAATAACAGCGTAGTAATAGGGTAGTAACAGCGTAATAACAGTGTAGTAACAGCATAATAACAGCATAGGAACAGGGTAGTAACAGTTTAGTAACAGCGTAATAACAGCGTAGGAAAAGCATAGTAACAGTGTAGTAAAGGCATAGTAACATCGTAGTGACTTTGTAGGAACAGCGTAGTGACTGTGTTTTAACAGCGTAGTAACAGCATAGCAACAGCTTATAAACAGTGTAGTAACAGTGTAATAACAGTGTAGTAACAGTGTAGTAACAGCGTAGTAACAGCGTAGTGACTGTGTAGTAACAGCGAGTGACTGTGTATTAGCAGCGTAGTAACAGCATAGCAACAGTGTAGTAACAGCGTAGTGACTGTGTAGTAACAGTGTAGTAACAGCGTAGTAACAGCGTAGTGACTGTGTAGTAACAGCGTAGTGACTGCGTAGTAACAGCGTAGTGACTGTGTAGTAACAGCGTGGTGACTGTGTAGTAACAGTGTAGTAACAGCATAGTGACTGTGTAGTAACGGTGTAGTAATGGTGTAGTAATGGTGTATTAACAGTGTATTAACGGTGTAGTAACATCGTAGTAACAGTGTATTAACGGTGTAGTAACGGTGTAGTAAATGTGTAGTAACAGTGTAGTAATGGTGTAGTAACATCGTAGTAACAGTGTAGTAACGGTGTAGTAACTGTGGAGATGAATATGTAGTAACAGTGTAGTAACAGTGTAGTACCGGTGTAGTAACATCGTAGTAACAGTGTAGTAACAGTGTAGTGACAGTGTAGTAACGGTGTAGTAACGGTGTAGTGAATGTGTAGTGAATGTGTAGTAACAGTGTAGTACCAGTGTAGTAACATCGTAGTAACAGTGTAGTAACGGTGTAGTAACAGTGTAGTAACGGTGTAGTGAATATGTAGTAA

Function

NR:

description
PREDICTED: uncharacterized protein LOC106597945, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1172382 True 1863 lncRNA 0.41 3 2783517 2786006

Neighbor

gene id symbol gene type direction distance location
LOC118937614 NA coding upstream 66523 2686828 ~ 2716994 (+)
LOC110517257 tcf4 coding upstream 1220696 1152988 ~ 1562821 (+)
LOC110536893 txnl1 coding upstream 1838331 917211 ~ 945186 (+)
katnal2 katnal2 coding upstream 2423066 339376 ~ 360451 (+)
sigmar1 sigmar1 coding upstream 2447921 324934 ~ 335596 (+)
il11ra LOC106568611 coding downstream 309528 3095534 ~ 3206784 (+)
LOC118937617 NA coding downstream 835390 3621059 ~ 3622127 (+)
LOC110536763 LOC106572512 coding downstream 1350314 4136320 ~ 4226240 (+)
LOC118937874 NA coding downstream 1782079 4568083 ~ 4569025 (+)
LOC110536864 LOC106568580 coding downstream 1792447 4578453 ~ 4797837 (+)
G1029609 NA non-coding upstream 3504 2744156 ~ 2780013 (+)
G1029607 NA non-coding upstream 44604 2736864 ~ 2738913 (+)
G1029565 NA non-coding upstream 117998 2665138 ~ 2665519 (+)
G1029533 NA non-coding upstream 165598 2617517 ~ 2617919 (+)
G1029521 NA non-coding upstream 186257 2596834 ~ 2597260 (+)
G1029627 NA non-coding downstream 16660 2802666 ~ 2803265 (+)
G1029629 NA non-coding downstream 19137 2805143 ~ 2805845 (+)
G1029637 NA non-coding downstream 30962 2816968 ~ 2818816 (+)
G1029648 NA non-coding downstream 66393 2852399 ~ 2853206 (+)
G1029649 NA non-coding downstream 67866 2853872 ~ 2855663 (+)
G1029570 NA other upstream 113010 2669904 ~ 2670507 (+)
G1029386 NA other upstream 339020 2443531 ~ 2444497 (+)
G1029035 NA other upstream 895923 1887147 ~ 1887594 (+)
G1028573 NA other upstream 1068943 1712531 ~ 1714574 (+)
G1029628 NA other downstream 17483 2803489 ~ 2804024 (+)
G1030609 NA other downstream 1036095 3822101 ~ 3822569 (+)
G1031335 NA other downstream 1889500 4675506 ~ 4677242 (+)
LOC110536873 inip other downstream 2131537 4917485 ~ 4965917 (+)

Expression

G1029586 Expression in all Baseline Samples

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G1029586 Expression in each Bioproject

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G1029586 Expression in each Sample
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Co-expression Network