Gene
RNA
| Item | Value |
|---|---|
| gene id | G1029627 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 2802666 ~ 2803265 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1172452 | True | 511 | lncRNA | 0.45 | 2 | 2802666 | 2803265 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118937614 | NA | coding | upstream | 85672 | 2686828 ~ 2716994 (+) |
| LOC110517257 | tcf4 | coding | upstream | 1239845 | 1152988 ~ 1562821 (+) |
| LOC110536893 | txnl1 | coding | upstream | 1857480 | 917211 ~ 945186 (+) |
| katnal2 | katnal2 | coding | upstream | 2442215 | 339376 ~ 360451 (+) |
| sigmar1 | sigmar1 | coding | upstream | 2467070 | 324934 ~ 335596 (+) |
| il11ra | LOC106568611 | coding | downstream | 292269 | 3095534 ~ 3206784 (+) |
| LOC118937617 | NA | coding | downstream | 818131 | 3621059 ~ 3622127 (+) |
| LOC110536763 | LOC106572512 | coding | downstream | 1333055 | 4136320 ~ 4226240 (+) |
| LOC118937874 | NA | coding | downstream | 1764820 | 4568083 ~ 4569025 (+) |
| LOC110536864 | LOC106568580 | coding | downstream | 1775188 | 4578453 ~ 4797837 (+) |
| G1029586 | NA | non-coding | upstream | 16660 | 2783517 ~ 2786006 (+) |
| G1029609 | NA | non-coding | upstream | 22653 | 2744156 ~ 2780013 (+) |
| G1029607 | NA | non-coding | upstream | 63753 | 2736864 ~ 2738913 (+) |
| G1029565 | NA | non-coding | upstream | 137147 | 2665138 ~ 2665519 (+) |
| G1029533 | NA | non-coding | upstream | 184747 | 2617517 ~ 2617919 (+) |
| G1029629 | NA | non-coding | downstream | 1878 | 2805143 ~ 2805845 (+) |
| G1029637 | NA | non-coding | downstream | 13703 | 2816968 ~ 2818816 (+) |
| G1029648 | NA | non-coding | downstream | 49134 | 2852399 ~ 2853206 (+) |
| G1029649 | NA | non-coding | downstream | 50607 | 2853872 ~ 2855663 (+) |
| G1029653 | NA | non-coding | downstream | 58206 | 2861471 ~ 2862834 (+) |
| G1029570 | NA | other | upstream | 132159 | 2669904 ~ 2670507 (+) |
| G1029386 | NA | other | upstream | 358169 | 2443531 ~ 2444497 (+) |
| G1029035 | NA | other | upstream | 915072 | 1887147 ~ 1887594 (+) |
| G1028573 | NA | other | upstream | 1088092 | 1712531 ~ 1714574 (+) |
| G1029628 | NA | other | downstream | 224 | 2803489 ~ 2804024 (+) |
| G1030609 | NA | other | downstream | 1018836 | 3822101 ~ 3822569 (+) |
| G1031335 | NA | other | downstream | 1872241 | 4675506 ~ 4677242 (+) |
| LOC110536873 | inip | other | downstream | 2114278 | 4917485 ~ 4965917 (+) |
