Gene
RNA
| Item | Value |
|---|---|
| gene id | G1029703 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 2952249 ~ 2954072 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1172555 | True | 329 | lncRNA | 0.39 | 2 | 2952249 | 2954072 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118937614 | NA | coding | upstream | 235255 | 2686828 ~ 2716994 (+) |
| LOC110517257 | tcf4 | coding | upstream | 1389428 | 1152988 ~ 1562821 (+) |
| LOC110536893 | txnl1 | coding | upstream | 2007063 | 917211 ~ 945186 (+) |
| katnal2 | katnal2 | coding | upstream | 2591798 | 339376 ~ 360451 (+) |
| sigmar1 | sigmar1 | coding | upstream | 2616653 | 324934 ~ 335596 (+) |
| il11ra | LOC106568611 | coding | downstream | 141462 | 3095534 ~ 3206784 (+) |
| LOC118937617 | NA | coding | downstream | 667324 | 3621059 ~ 3622127 (+) |
| LOC110536763 | LOC106572512 | coding | downstream | 1182248 | 4136320 ~ 4226240 (+) |
| LOC118937874 | NA | coding | downstream | 1614013 | 4568083 ~ 4569025 (+) |
| LOC110536864 | LOC106568580 | coding | downstream | 1624381 | 4578453 ~ 4797837 (+) |
| G1029681 | NA | non-coding | upstream | 34269 | 2917579 ~ 2917980 (+) |
| G1029676 | NA | non-coding | upstream | 49503 | 2901185 ~ 2902746 (+) |
| G1029671 | NA | non-coding | upstream | 59601 | 2891751 ~ 2892648 (+) |
| G1029653 | NA | non-coding | upstream | 89415 | 2861471 ~ 2862834 (+) |
| G1029649 | NA | non-coding | upstream | 96586 | 2853872 ~ 2855663 (+) |
| G1029715 | NA | non-coding | downstream | 20336 | 2974408 ~ 2974809 (+) |
| G1029752 | NA | non-coding | downstream | 91860 | 3045932 ~ 3046256 (+) |
| G1029480 | NA | non-coding | downstream | 94053 | 3048125 ~ 3051090 (+) |
| G1029777 | NA | non-coding | downstream | 151488 | 3105560 ~ 3106930 (+) |
| G1029779 | NA | non-coding | downstream | 157197 | 3111269 ~ 3111804 (+) |
| G1029628 | NA | other | upstream | 148225 | 2803489 ~ 2804024 (+) |
| G1029570 | NA | other | upstream | 281742 | 2669904 ~ 2670507 (+) |
| G1029386 | NA | other | upstream | 507752 | 2443531 ~ 2444497 (+) |
| G1029035 | NA | other | upstream | 1064655 | 1887147 ~ 1887594 (+) |
| G1028573 | NA | other | upstream | 1237675 | 1712531 ~ 1714574 (+) |
| G1030609 | NA | other | downstream | 868029 | 3822101 ~ 3822569 (+) |
| G1031335 | NA | other | downstream | 1721434 | 4675506 ~ 4677242 (+) |
| LOC110536873 | inip | other | downstream | 1963471 | 4917485 ~ 4965917 (+) |
| G1031481 | NA | other | downstream | 2184043 | 5138115 ~ 5140739 (+) |
