XLOC_002942


Basic Information

Item Value
gene id XLOC_002942
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 36595380 ~ 36610901 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00006098
CCTTGTTTTCCCCACAAAAACACGGATGAGGATGGCATACGTTTTCCCGCTCTTTCTCTGACTCATAATCTAAATACTGACGCAATAACGTTTCTTGCAGCCAACAGAAATGCATACAGCCTCTGCGCTCACAATGTTATGATCAATAAAATAGTTTAGCAACGACTTTTCTGAGTATCTAGGACTAGTAGTAACATTGCAGTTCTAGGAACAGTacatccaaactcggtcctggagggccggtgtcctgcagagtttagctccaacttgcgtcaacacacctgccaggaagtttctagtatctaGTATagcgcttgattagctggttcaggtgtgtttgattagagttggacctaaactctccaggacaccgtccctccaggaccgagtttggacacccctgatctaagagTTTTGCCATTAAAAGTGGCACTGCTGCTGCTGAAAAGAGTTGAAGTGGAGATTCAGCTTCTCCTAGATTTCTACATGAACAGATAAAAAAACACGAGAGAAGGACTGAACTCGAGCTGACCAGACCAATAAATACCAGACGAGTGTTGAACCGAGggggaaaccggagagcccagaggaaacccacgccaactcagggggaacatgcaaactccacacagaaacaccaactggcccagccgggactcgaaccagagacctttttgctgtgaggtgctagtgctaaccactgagccaccatgtctcCCTATTTGATTTTCTTCCTTATGGTATTATTTGTTAAACCTtcactttttcaaactgcttCACAAGGATCCATGTTCCTGATTCCACAGCCTGTCATTTTGGCAGTTTTCCTTCTATAAGCTAGCTTTGAGTTCTGAAACTGAAATACATTGTGCTTcacgcaggtgagtgggcttaacaaaccacttGTAGGAGACACTCTTTTCCTCTTCATATGTTTCATTAGATgtcacaaatataataaatatgtcaCATTTAGGACTCCTACATTtttcctcagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00006098 True 1031 lncRNA 0.45 3 36595380 36610901

Neighbor

gene id symbol gene type direction distance location
XLOC_002941 slc1a3b coding downstream 2894 36558804 ~ 36592486 (-)
XLOC_002940 nipblb coding downstream 48252 36475860 ~ 36547128 (-)
XLOC_002939 NA coding downstream 125485 36465343 ~ 36469895 (-)
XLOC_002938 ubl3a coding downstream 188818 36363318 ~ 36406562 (-)
XLOC_002937 or110-1 coding downstream 334890 36259048 ~ 36260490 (-)
XLOC_002943 rsf1b.1 coding upstream 2103 36613004 ~ 36633926 (-)
XLOC_002944 NA coding upstream 31265 36642166 ~ 36650904 (-)
XLOC_002945 AL845435.1 coding upstream 43296 36654197 ~ 36662611 (-)
XLOC_002946 dnajb13 coding upstream 62486 36673387 ~ 36682522 (-)
XLOC_002947 mrpl48 coding upstream 73099 36684000 ~ 36691681 (-)
XLOC_002926 BX088524.4 non-coding downstream 432086 36163179 ~ 36163294 (-)
XLOC_002925 NA non-coding downstream 501847 35811752 ~ 36093533 (-)
XLOC_002923 NA non-coding downstream 940700 35650584 ~ 35654680 (-)
XLOC_002922 BX663516.3 non-coding downstream 974931 35620333 ~ 35620449 (-)
XLOC_002955 BX323076.2 non-coding upstream 430177 37041078 ~ 37042232 (-)
XLOC_002957 CT573231.1 non-coding upstream 741579 37352480 ~ 37357303 (-)
XLOC_002958 NA non-coding upstream 807333 37418234 ~ 37476245 (-)

Expression


Co-expression Network