G1034443 (yo84)


Basic Information

Item Value
gene id G1034443
gene name yo84
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 7827880 ~ 7834578 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1178568
GGAGAGCTAATAACCCTCCCCCATGACTGGGACGGAGAGCTAATAACCCTCCCCCATGACTGGGACGGAGAGCTAATAACCCTCCCCCATGACTGGGACGGAGAGCTAATAACCCTCCCCCATGACTGGGACGGAGAGCTAATAACCCTCCCCCATGACTGGGACGGAGAGCTAATAACCCTCCCCCATGACTGGGACGGAGAGAGGGTTCAGCGTTCATTGCACTATGAAGTCTGTCCATAGTCCAGTGGTCAAGCAGAGCCATTGCCACAGCTGGTGTGATCAAAAGGTTTTCAGTGACTTTCAAAAGTTCAGTGACCTAGTGCCCATTGGCCtagtttaaatcaaatcaaatttgattaaaatacacatatttagcagttgttattgtgggtgtagcgaaatgcttgtgtttctagctccaacggtgcagtaatatctaacaattcacaacaatacacacagatcAAGAATGAAAGCTGACAACACACCGCTGAGACCCTGCCGAACTACTGCGGTCCATTCGGATAAAGGGAGATCAAGAATTGGAAGAGGGATCCATGTGAATGCTGCAAAACTGGATTTTGCAATTGCGGTGGATCCTGCAAGTGCTCCAACTGTGCATGCACCAGTTGTCAGAAAGAAAGTTGTGATCACAGGCTGTGATACCTGTGATACCAGCTGGCCCGGTGTATGACTATGACATCACAATGCAGTCCATTCCCTATGACTATGACATCACAAAGCAGtctggaattaagaaatatataaatattagtacGAGCAATTTAAAAATCTggtgtatagatatatatttattacacttttttcacctttatttaaccaggtaggctagttgagaacaagttctcattttcaactgcgacctggccaagataaagcaaagacaCAAATAACAACAGTTACACATCGGATAAACAGACGTACAGtttataacacaatagaaaaaatctatatacagtgtgtacaaatgtaattagggaggtaaggcaaaacaataggccatagtggcgtaataatgacaatttagcaattaacactggagtggtatatgtgcagaagatgaaagtgaaagtagagatactggggtgcgaaGGAGCAAAAAAAATACCACTATGGGCacaaggtagttgggtgggctatttacagatgggctggttttctggttactacgtgattccacgtgtgttacttcatagttttgatgtcttcactatcattatacaatctagaaaatagtacaaataagggaaaacccttgaatgagtagaagtgtccaaacttttgactggtactgtttatatatgtatgtatatgtgatgTAAAGACATGGTCAGTATGTGGATATAATATTTAGTGTATCTGtaggatagaatagtatagaTAATAgaaatagttgaataggatggccttgactagaatataAAATGAGTagaacagtatgtaaacattaaagtgaccagtgattccatgtctatgtacacgGGGCAGCAgcttctaaggtgcagggttgagtaaccgagcggtagccagctagtgacagtgactaagttcacctcctccctgtaggttgtctaGTAATctggcctactactgttgtgtgaacagggagtacaggtggggGCAGGccatgaaatagggtgcaggccaggcagcaggctgttagccagcctgccagcatagtggagtctgccactagcacagtcggtgtagtcagctcagctatccccattgagaccgtgtctgtgcctcgacctaggttgggcaaaactaaacatggtggtgttcgccttagcaatcgcACTaagataaagacctcctccattcctaccattattgaaagagattgtgatacctcacatctcaaaatagggccacttaatgttagatcccgtacttcaaaggcaattatagtcaatgaactaatcgctgatcataatcttgatgtgattggcctgactgaaacatggcttaagcctgatgaatttactgtgttaaatgaggcctcatctcctggttacactagtgagcatatcccccgtgcatcccgtaaaggcggaggtgttgctaacatttacgatagcaaatttcaatttacatttttttttttgacttTTAACTCTTtggagcttctagtcatgaaatctatgcagcctactcaatcactttttatagctactgtttaccggcctcctgggccatatacaacGTTCCTCAATGAGTTCCCTGAATTTctattggaccttgtagtcatggcagataatattctaatttttggtgactttaatattcacatggaaaagtccacagacccactccaaaaggctttcggagccatcatcgactcagtgggttttgtccaacatgtctctggacccactcactgtcacagtcatactctggaccatggaataaatgttgtgtatcttaatgtttttcctcataatcctggactatcggaccaccattttattacgtttgtaattgcaacaaataatctgctcagacccaaccaaggagcatcaaaagtcgtgctataaattcacagacaacacacagattatttgatgcccttccagactccctctgcctacccaaggacgtcagaggacaaaaatcagttaaccacctaaatgaggaactcaatttaaccttgcgcaataccctagatgcagttgcacccctaaaactaaaaacatttctcataagaaactatctccctggtatacagaaaatacccgagctctgaagcaagcttccagaaaattggaacggaaatggcgctacaccaaactggaagtcttccgactagcttagaaagacagtaccgtgcagtaccgaagagccctcactgctgctcgatcatcctgtTTTTCCAACTTATTGAGGAAAATAAGGACAATCCGAAATTGATTTTTGATAccgtcgcaaagctaactaaaaagcagcattctccaagagaggatggctttcacttcagcagtaataaattcatgaacttctttgaggaatagataatgatcattagaaagcaaattacggactcctctttaaatctgcgtattccttcaaagctcagttgtcctgagtctgcacaactctgccaggacctaggatcaagagagacactcaagtgttttagtactatatctcttgacacaatgatgaaataATCATTGGCTCTAAACCTTCAAGcagcatactggaccctattccaactaaactactgaaagagctgcttcctgtgcttggccctcctattgtgaacataataaatggctatccacaggatgtgtaccaaactcactaaaagtggcagtaatgaagcctctcttgaaaaagccaaaccttgacccagaaaatattaactatcggcctatatcgaatcttccattcctctcaaaatgtttagaaaaggctgttgcgcagcaactcactgccttcctgaagacaaacaatgtatacgaaatgcttcagtctggttttagaccccatcatagcactgagactgcacttgtgaaggtggtaaattaccttttaatggcatcagaccgaccgaggctctgcatctgtcctcgtgctcctagaccttagtgctgcttttgataccatcgatcaccacattcttttggagagattggaaacccaaattggtctacacggacaagttctggcctggtttagatcttatctgtcggaaagatatcagtttgtctctgtgaatggtttgtcctctgacaaatcaactgtaaatttcggtgttcctcaaggttccgttttaggaccactattgttttcactatagattttacctcttggggatgtcattcgaaatcataatgttaactttcactgctatgcggatgacacgcagctgtacatttcaatgaaacatggtgaagccccaaaattgccctcaaaagaagcctgtgtttcagacataaggaagtggatggctgcaaacgttctacttttaaactcggacaaaacagagatgcttgttctaggtcccaagaaacaaagagatcttctgttgaatctgacaagtaatcttaatggttgtacagtcgtctcaaataaaactgtgatgaacatatcaagactgtttcaaggacagcttttttccatctacgtaacattgcaaaaatcagaaactttccgtccaaaaatgatgcagaaaaattaatccatgcttttgtcacttctaggttagactactgcaatgctctactttctggctacccagataaagcactaaataaacttcagttagtgctaaatacggccactagaatcctgactagaaccaaaacatttgatcatattactccagtgctagcctccctacactggcttcctgttaaggcaagggctgatttcaaggttttactcctaacctacaaagcattacatgggcttgctcctacctatctctctgatttggtcctgccgtacatacctacacgtacgctacggtcacaagacgcaggcctcctaattgtccctagaatttctaagcaaacagctggaggcagggctttctcctatagagctccatttttatgcaatggtctgcctacccatgtgagagacgcagactcggtctcaacctttaattctttactgaagacttatctcttcagtGGATCATATGATTGAgtctagtctggcccaggagtgtgaaggtgaacagaggctctggagcaacgaaccgcccttgctgtctctgcctggccggttcccctctttccactgggattctctgcctctaaccctattacatgggctgagtcactagcttactagggctctttcataccgtccctcggaggggtgcatcacttgagtgggttgagtcactgacgtgatcttcctgtctgggttggcgcaccccccttgggttgtgtcgtggtggagatctttgtgggctatactcggccttgtctcaggatggtaagttggtggttgaagatatccctctagtggtgtgggggctgtgctttggcaaagtgggtggggttatatccttcctgtttggccctgtccggggtatcatcggatggggccacagtgtctcctgacccctcctgtctcaacctccagtatttatgctgcagtagtttatgtgtcggggggctaaggtcagtttgttatatctggagtacttctcctgtcttatccggtgtcctgtgtgaatttaagtgcgctctctctaattctctctttctttctttctctcggaggacctgagcccaaggaccatgcctcaggactacctggcatgaggactccttgctgtccccagtccacctggccgtgctgctgctctagtttcaactgttcagcacctgaggtgctgacttgctgcaccctcaacaactactgtgattattattatttgaccatgctggtcatttatgaacattttaacatcttggccatgttctgttataatctccacccggcacagccagaagaggactggccaaccctcatagcctggttcctctctaggtttcttcctaggttttggcctttctatggagtttttcctagccaccgtgcttctacacctgcattgcttgctgtttggggttttaggctgggtttctgtacagcactttgagatatcagctgatgtatgaagggctatataaatacatttgatttgatttgatttgagcacacggcattgtggggccccagtgttgaggattagcgtaGTGGAGGggttgtttcctacattcaccacgtgggggtggcccgtcaggaaatccaggacccagttgcacagggcaggggttcagacccagggcacCGAGCTTaaagatgagcttggagggtactatggtgttgaaggctgagctgttgtcaatgaacagcattcttacataggtattcctcttgtccagatgagatagggcagtgtgtagtgcaatagcgattgcatcatctgcaaatcttttggggtggtaagcaaagagaagtgggtctagggtctcaggtaaggtagaggtggtatgatccttaactagcctgtcaaagcacttcatgatgacagaagtgagtgcaacgggggcgatagtcatttagttcagttacctttgctttcttgggtacaggaacaatggtggacatcttgaagcaagtggggacagcagactgggatagggagagattgaatatgtccgtaaacactccagccataGGAAGGGAGCAGCagaatggagtcgtgatctgatttgccaaagagagggctggggagggccttgtaggcatcccggaaggGAGAGTAACAATGGTTGAGAGTTTTTGAAGCTACAGGCAATGAATGTGTTGATAGAACGTCGGTGgcgttttcctcagattttcTTTAttgaaatccccagctacaataaatgtggtctcaggatatgtggtttccagtttccattgtagttccttgagggcccaGATATTGCTGTCTCATCGGTAAGAAGAGGTTGTGGGCCTAATTTCCattgtagttccttgagggcccaGATATTGCTGTCTCATCGGTAAgaagcacacgctccagcaggtatatctctctagtcacccccaaaaccaattctttctttggccgtctctctttccagttctctgctgccaatgattggaacg

Function

NR:

description
ORF2 protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1178568 True 6666 TUCP 0.44 2 7827880 7834578

Neighbor

gene id symbol gene type direction distance location
LOC110523118 LOC106572051 coding downstream 6362 7645369 ~ 7821518 (-)
LOC110536901 LOC106568527 coding downstream 214545 7606957 ~ 7613335 (-)
atp8b1 LOC106568528 coding downstream 241354 7511022 ~ 7586526 (-)
LOC110536886 tcf4 coding downstream 412064 7403125 ~ 7415816 (-)
LOC110536888 LOC106568538 coding downstream 450947 7311685 ~ 7376933 (-)
stbd1 stbd1 coding upstream 3029 7837607 ~ 7851608 (-)
LOC101268972 LOC101448022 coding upstream 65048 7898867 ~ 7900915 (-)
LOC110536909 LOC106568505 coding upstream 144265 7978843 ~ 7981203 (-)
LOC110536914 LOC106568507 coding upstream 293270 8127848 ~ 8205393 (-)
LOC100136343 LOC100136343 coding upstream 411432 8246010 ~ 8252914 (-)
G1034442 NA non-coding downstream 498 7826033 ~ 7827382 (-)
G1034446 NA non-coding downstream 2184 7796976 ~ 7825696 (-)
G1034470 NA non-coding downstream 4106 7823223 ~ 7823774 (-)
G1034449 NA non-coding downstream 19662 7807443 ~ 7808218 (-)
G1034421 NA non-coding downstream 61589 7761916 ~ 7766291 (-)
G1034473 NA non-coding upstream 564 7835142 ~ 7835362 (-)
G1034452 NA non-coding upstream 25489 7860067 ~ 7862363 (-)
G1034499 NA non-coding upstream 66441 7901019 ~ 7901231 (-)
G1034504 NA non-coding upstream 74244 7908822 ~ 7909153 (-)
G1032941 NA other downstream 1627546 6197017 ~ 6200334 (-)
G1032314 NA other downstream 2044516 5782940 ~ 5783364 (-)
LOC110536877 mob3b other downstream 2283372 5538381 ~ 5607736 (-)
G1032158 NA other downstream 2290268 5535481 ~ 5537612 (-)
G1034667 NA other upstream 444761 8279339 ~ 8279866 (-)
G1035160 NA other upstream 1001678 8836256 ~ 8838834 (-)
hcn1 hcn1 other upstream 1183929 9018507 ~ 9206417 (-)
G1035717 NA other upstream 1698922 9533500 ~ 9548135 (-)
LOC110536932 NA other upstream 1851451 9684834 ~ 9696461 (-)

Expression


Co-expression Network