Gene
RNA
| Item | Value |
|---|---|
| gene id | G1034452 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 7860067 ~ 7862363 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| lysosome membrane protein 2 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1178598 | True | 454 | lncRNA | 0.44 | 2 | 7860067 | 7862363 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| stbd1 | stbd1 | coding | downstream | 8459 | 7837607 ~ 7851608 (-) |
| LOC110523118 | LOC106572051 | coding | downstream | 38549 | 7645369 ~ 7821518 (-) |
| LOC110536901 | LOC106568527 | coding | downstream | 246732 | 7606957 ~ 7613335 (-) |
| atp8b1 | LOC106568528 | coding | downstream | 273541 | 7511022 ~ 7586526 (-) |
| LOC110536886 | tcf4 | coding | downstream | 444251 | 7403125 ~ 7415816 (-) |
| LOC101268972 | LOC101448022 | coding | upstream | 37263 | 7898867 ~ 7900915 (-) |
| LOC110536909 | LOC106568505 | coding | upstream | 116480 | 7978843 ~ 7981203 (-) |
| LOC110536914 | LOC106568507 | coding | upstream | 265485 | 8127848 ~ 8205393 (-) |
| LOC100136343 | LOC100136343 | coding | upstream | 383647 | 8246010 ~ 8252914 (-) |
| LOC118937621 | NA | coding | upstream | 416178 | 8278541 ~ 8288538 (-) |
| G1034473 | NA | non-coding | downstream | 24705 | 7835142 ~ 7835362 (-) |
| G1034442 | NA | non-coding | downstream | 32685 | 7826033 ~ 7827382 (-) |
| G1034446 | NA | non-coding | downstream | 34371 | 7796976 ~ 7825696 (-) |
| G1034470 | NA | non-coding | downstream | 36293 | 7823223 ~ 7823774 (-) |
| G1034449 | NA | non-coding | downstream | 51849 | 7807443 ~ 7808218 (-) |
| G1034499 | NA | non-coding | upstream | 38656 | 7901019 ~ 7901231 (-) |
| G1034504 | NA | non-coding | upstream | 46459 | 7908822 ~ 7909153 (-) |
| G1034505 | NA | non-coding | upstream | 47381 | 7909744 ~ 7910070 (-) |
| G1034507 | NA | non-coding | upstream | 48398 | 7910761 ~ 7911158 (-) |
| G1034443 | yo84 | other | downstream | 25489 | 7827880 ~ 7834578 (-) |
| G1032941 | NA | other | downstream | 1659733 | 6197017 ~ 6200334 (-) |
| G1032314 | NA | other | downstream | 2076703 | 5782940 ~ 5783364 (-) |
| LOC110536877 | mob3b | other | downstream | 2315559 | 5538381 ~ 5607736 (-) |
| G1034667 | NA | other | upstream | 416976 | 8279339 ~ 8279866 (-) |
| G1035160 | NA | other | upstream | 973893 | 8836256 ~ 8838834 (-) |
| hcn1 | hcn1 | other | upstream | 1156144 | 9018507 ~ 9206417 (-) |
| G1035717 | NA | other | upstream | 1671137 | 9533500 ~ 9548135 (-) |
| LOC110536932 | NA | other | upstream | 1823666 | 9684834 ~ 9696461 (-) |
