G1034614


Basic Information

Item Value
gene id G1034614
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 8123281 ~ 8124156 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1178798
GTGAAAAGCTGAATACAtcgaggcaggtagtctagtggttagagtgttggactagtaaccgaaagattgcaagatcaaatccccaagcggacaaggtaaaaaaaaatatgttgttctgcccctgaacaggcagttaacccactgttactaggctgtcattgaaaataagaatttgttcctaactgacttgcctagtaaaggcaacggtaaaaaaatatatatatatattgctttACCATAACAGTTAGAAGAATACTGTGTGCTctcaggcctctactccaccactaccacatatctacagtactaaatctgtgtgttttttaaatctacttttactgcttgcgtcagttccatgtagtcatggctctatgtagtactgtggaatagagttccatgtagtcatggctctatgtagtactgtggaatagagttccatgtagtcatggctctatgtagtgctgtggaatagagttccatgtagtcatggctctatgtagtactgtggaatagagttccatgtagtcatggctctatgtagtactgtggaatagagttccatgtagtcatggctctatgtagtactgtggaatagagttccatgtagtcatggctctatgtagtactgtggaatagagttccatgtagtcatggctctatgtagtgctgtggaatagagttccatgtagtcatggctctatgtagtactgtggaatagagttccatgtagtcatggctctatgtagtgctgtggaatagagttccatgtagtcatggctctatgtagtactgtggaatagagttccatgtagtcatggctctatgtagtgctgTGCGCCTTCCCACAGTATGTTCTGGACTTAGGGACTGTGTAATAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1178798 True 876 lncRNA 0.41 1 8123281 8124156

Neighbor

gene id symbol gene type direction distance location
LOC110536909 LOC106568505 coding downstream 142078 7978843 ~ 7981203 (-)
LOC101268972 LOC101448022 coding downstream 222366 7898867 ~ 7900915 (-)
stbd1 stbd1 coding downstream 271673 7837607 ~ 7851608 (-)
LOC110523118 LOC106572051 coding downstream 301763 7645369 ~ 7821518 (-)
LOC110536901 LOC106568527 coding downstream 509946 7606957 ~ 7613335 (-)
LOC110536914 LOC106568507 coding upstream 3692 8127848 ~ 8205393 (-)
LOC100136343 LOC100136343 coding upstream 121854 8246010 ~ 8252914 (-)
LOC118937621 NA coding upstream 154385 8278541 ~ 8288538 (-)
ptpn13 ptpn13 coding upstream 167395 8291551 ~ 8460671 (-)
arhgap24 arhgap24 coding upstream 470173 8594329 ~ 8809553 (-)
G1034561 NA non-coding downstream 22922 8099689 ~ 8100359 (-)
G1034592 NA non-coding downstream 49341 8073670 ~ 8073940 (-)
G1034566 NA non-coding downstream 83691 8039255 ~ 8039590 (-)
G1034564 NA non-coding downstream 89050 8033937 ~ 8034231 (-)
G1034563 NA non-coding downstream 89791 8033184 ~ 8033490 (-)
G1034610 NA non-coding upstream 101762 8225918 ~ 8226507 (-)
G1034644 NA non-coding upstream 107120 8231276 ~ 8232542 (-)
G1034649 NA non-coding upstream 119507 8243663 ~ 8244337 (-)
G1034655 NA non-coding upstream 131636 8255792 ~ 8257078 (-)
G1034654 NA non-coding upstream 132070 8256226 ~ 8256848 (-)
G1034443 yo84 other downstream 288703 7827880 ~ 7834578 (-)
G1032941 NA other downstream 1922947 6197017 ~ 6200334 (-)
G1032314 NA other downstream 2339917 5782940 ~ 5783364 (-)
LOC110536877 mob3b other downstream 2578773 5538381 ~ 5607736 (-)
G1034667 NA other upstream 155183 8279339 ~ 8279866 (-)
G1035160 NA other upstream 712100 8836256 ~ 8838834 (-)
hcn1 hcn1 other upstream 894351 9018507 ~ 9206417 (-)
G1035717 NA other upstream 1409344 9533500 ~ 9548135 (-)
LOC110536932 NA other upstream 1561873 9684834 ~ 9696461 (-)

Expression


Co-expression Network