G1033926


Basic Information

Item Value
gene id G1033926
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 8123637 ~ 8125545 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1177889
acatggaactctattccacagtactacatagagccatgactacatggaactctattccacagcactacatagagccatgactacatggaactctattccacagtactacatagagccatgactacatggaactctattccacagtactacatagagccatgactacatggaactgacgcaagcagtaaaagtagatttaaaaaacacacagatttagtactgtagatatgtggtagtggtggagtagaggcctgagAGCACACAGTATTCTTCTAACTGTTATGGTaaagcaatatatatatatatttttttaccgttgcctttactaggcaagtcagttaggaacaaattcttattttcaatgacagcctagtaacagtgggttaactgcctgttcaggggcagaacaacatatttttttttaccttgtccgcttggggatttgatcttgcaatctttcggttactagtccaacactctaaccactagactacctgcctcgaTGTATTCAGCTTTTCACTGCTGGTATAGTGACTTGCCAATGTTAATAGAGAAAGTACAAAATGTTTTGTAAATTCATACACTGTAAACTGTAGCTTGTGTTGTGCTTTTATTAATAGTTTGAATGTTTTTCAAGAGGATACATggccaaacgtatgtggacacccttcaaatgagtggatttgactATTTCAGCCAAACCCGTTGCTGATAAGGTGTAtagaatcgagcacaccgccatgctatctccatagacaaacatcggcAGTAAAACGGCCTTAGTGAAGAGTTCAGTGAGCTGAACATTCAAACGATTAACGATCAACGTGGcaccgttataggatgccaccCATCCAGCAAGTCAGTtggtcacatttctgccctgctagagcttccccaggtcgactgtaagtgctgttattgtgaagtgaaaatatctaggagcaacaacggctcagctgtgaagtggtaggccacacaagctcaaggATCggaaccgccgagtgctgaagcgtgtaaaaaccGTCTGTGCTCTGTTGGAGCACTCACTacctagttccaaactgcctctggaagcaacgtcagcacaagaactgttggtCAGGAgtttcataaaatgggtttccatggccaagcagccgcacacacacaagcctaagatcaaccatgcgcaatgccatgcttcggttggagtggtgtaaagcttgtcgccattggactctggagcagtggaaacattctCTGGATTTGATGAAtcccacttcaccatctggcagtctgactgacgaatccaggagaacgctacccgcccaaatgcatagtgctaacCGTAAAGTTTGCGgaaggagaaataatggtctgtggctgtttttcatgattcgggctaagccccttagtttcagtgaacagaaaccttaatgctacagcatacaataacattctagacgattctgtaattccaactttgtggtaacagtttgggaaaggtcctttcctgttgcagcatgacaatgccccatgtAGTGTGTTTGTGGATTCTGGGATTAATTTACTTCTGAtacctttcatcaaggttttcGATTTCGTTTTTTTGTAAAAAGTCAAGGTAAACGAATCCAtgaaaataatataatttaatgTGTCTTCAATTACCCAATTTTCATGAATTTGATGATATAAGCTTGAAGCTCATTCAAAAACAGTACGGGACTTGAACCAGGAAGAAGACTTTCATAGGGTATATAACGTTACCCAGGACCTTCTAATTAGCAGGTTTTGTATGGGTGGAGTTTTGACTTGCCAGGTGACATCACTAGACGGTATAAatgaatagaccaataacaaagagagttccaaattAGAGGGCAGCATTCCAGAAAGAACTTTCggacaaaaatgtttttttttt

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1177889 True 1909 lncRNA 0.42 1 8123637 8125545
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Neighbor

gene id symbol gene type direction distance location
LOC110536912 LOC106568508 coding upstream 546 8072971 ~ 8123091 (+)
LOC110536911 LOC106568509 coding upstream 59632 8041387 ~ 8064005 (+)
sdad1 sdad1 coding upstream 105021 8005353 ~ 8018616 (+)
LOC110536907 LOC106568513 coding upstream 151141 7912756 ~ 7972496 (+)
scarb2c LOC105006632 coding upstream 224038 7860038 ~ 7899599 (+)
LOC110536916 LOC106568505 coding downstream 163027 8288572 ~ 8291117 (+)
mapk10 mapk10 coding downstream 346501 8472046 ~ 8586443 (+)
LOC118937876 NA coding downstream 701036 8826581 ~ 8829380 (+)
LOC110536778 LOC106568497 coding downstream 740623 8866168 ~ 8968377 (+)
ccbe1 ccbe1 coding downstream 1223634 9349179 ~ 9459891 (+)
G1033932 NA non-coding upstream 37665 8085528 ~ 8085972 (+)
G1033909 NA non-coding upstream 83448 8039914 ~ 8040189 (+)
G1033908 NA non-coding upstream 84047 8039326 ~ 8039590 (+)
G1033907 NA non-coding upstream 85742 8037696 ~ 8037895 (+)
G1033905 NA non-coding upstream 91467 8031914 ~ 8032170 (+)
G1033936 NA non-coding downstream 261 8125806 ~ 8181922 (+)
G1033943 NA non-coding downstream 21290 8146835 ~ 8147700 (+)
G1033970 NA non-coding downstream 55001 8180546 ~ 8180879 (+)
G1033994 NA non-coding downstream 86329 8211874 ~ 8213598 (+)
G1034003 NA non-coding downstream 104971 8230516 ~ 8231664 (+)
G1033822 stbd1 other upstream 272086 7837686 ~ 7851551 (+)
G1033821 yo84 other upstream 289261 7827978 ~ 7834376 (+)
G1033752 LOC106568522 other upstream 475410 7647649 ~ 7648227 (+)
G1033419 NA other upstream 769633 7353631 ~ 7354004 (+)
G1032448 NA other upstream 2099041 6022774 ~ 6029541 (+)
G1034024 NA other downstream 136616 8262161 ~ 8264290 (+)
G1035014 NA other downstream 829248 8954793 ~ 8955237 (+)
G1035405 NA other downstream 1125376 9250921 ~ 9251578 (+)
cplx4a cplx4 other downstream 1414994 9533126 ~ 9548216 (+)
G1035825 nedd4l other downstream 1637702 9763247 ~ 9764989 (+)

Expression

G1033926 Expression in all Baseline Samples

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The chart has 1 Y axis displaying values. Range: 0 to 3.
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G1033926 Expression in each Bioproject

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G1033926 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 100.
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Co-expression Network