G1034649


Basic Information

Item Value
gene id G1034649
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 8243663 ~ 8244337 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1178836
ctgttacctatagatagacaggctagaataacacatcaaccctgttacctatagatagacaggctagaataacacatcaaccctgttacctatagatagacaggctagaataacacatcaaccctgttacctatagatagatagatagacaggctagaataacacatcaaccctgttacctatagatagacaggctagaataacacatcaaccctgttacctatagatagacaggctagcataacacatcaaccctgttacctatagatagacaggctagaataacacatcaaccctgttacctatagatagacaggctagaataacacatcaaccctgttacctatagatagacaggctagaataacacatcaaccctgttacctat

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1178836 True 388 lncRNA 0.39 2 8243663 8244337

Neighbor

gene id symbol gene type direction distance location
LOC110536914 LOC106568507 coding downstream 38270 8127848 ~ 8205393 (-)
LOC110536909 LOC106568505 coding downstream 262460 7978843 ~ 7981203 (-)
LOC101268972 LOC101448022 coding downstream 342748 7898867 ~ 7900915 (-)
stbd1 stbd1 coding downstream 392055 7837607 ~ 7851608 (-)
LOC110523118 LOC106572051 coding downstream 422145 7645369 ~ 7821518 (-)
LOC100136343 LOC100136343 coding upstream 1673 8246010 ~ 8252914 (-)
LOC118937621 NA coding upstream 34204 8278541 ~ 8288538 (-)
ptpn13 ptpn13 coding upstream 47214 8291551 ~ 8460671 (-)
arhgap24 arhgap24 coding upstream 349992 8594329 ~ 8809553 (-)
esm1 esm1 coding upstream 613294 8857631 ~ 8860067 (-)
G1034644 NA non-coding downstream 11121 8231276 ~ 8232542 (-)
G1034610 NA non-coding downstream 17156 8225918 ~ 8226507 (-)
G1034614 NA non-coding downstream 119507 8123281 ~ 8124156 (-)
G1034561 NA non-coding downstream 143304 8099689 ~ 8100359 (-)
G1034592 NA non-coding downstream 169723 8073670 ~ 8073940 (-)
G1034655 NA non-coding upstream 11455 8255792 ~ 8257078 (-)
G1034654 NA non-coding upstream 11889 8256226 ~ 8256848 (-)
G1034522 NA non-coding upstream 62690 8307027 ~ 8307650 (-)
G1034696 NA non-coding upstream 120709 8365046 ~ 8369169 (-)
G1034718 NA non-coding upstream 172998 8417335 ~ 8418652 (-)
G1034443 yo84 other downstream 409085 7827880 ~ 7834578 (-)
G1032941 NA other downstream 2043329 6197017 ~ 6200334 (-)
G1032314 NA other downstream 2460299 5782940 ~ 5783364 (-)
LOC110536877 mob3b other downstream 2699155 5538381 ~ 5607736 (-)
G1034667 NA other upstream 35002 8279339 ~ 8279866 (-)
G1035160 NA other upstream 591919 8836256 ~ 8838834 (-)
hcn1 hcn1 other upstream 774170 9018507 ~ 9206417 (-)
G1035717 NA other upstream 1289163 9533500 ~ 9548135 (-)
LOC110536932 NA other upstream 1441692 9684834 ~ 9696461 (-)

Expression


Co-expression Network