G1034963


Basic Information

Item Value
gene id G1034963
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 8831648 ~ 8832191 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1179217
agcatcgttacccattgctccacaaaagccgcggcccttgcagagcaaggggaactactacttcaaggtctcagagcaagtgacgtcaccgattgaaacgctatttagcgagcaccgctaactaagctagccgtttcgcatccgttacactcaccccccttttgaccttcctccttttccgcagcaaccagtgatccgggtcacggcaccaatgtaacagtataactttagaccgtcccctcgcccatacccgggcgcgaaccagggaacctctgcacacatcaacaacagtcacccacgaagcatcgttacccatcgctccacaaaagccacggcccttgcagagcaaggggaactactacttcaaggtctcagagcaagtgacatcaccgattgaaactctatttagcgcgcaccgctaactaagctagccgtttcgcATCCGTTACATCAGGACTCTTTTGTTGAAAATGTACAACATCtatgttggtctgatgtgtatgAGGAAGTGAATCCAGATGCATCACTGGAAGTATTTGTGCAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1179217 True 544 lncRNA 0.51 1 8831648 8832191

Neighbor

gene id symbol gene type direction distance location
arhgap24 arhgap24 coding downstream 22095 8594329 ~ 8809553 (-)
ptpn13 ptpn13 coding downstream 370977 8291551 ~ 8460671 (-)
LOC118937621 NA coding downstream 543110 8278541 ~ 8288538 (-)
LOC100136343 LOC100136343 coding downstream 578734 8246010 ~ 8252914 (-)
LOC110536914 LOC106568507 coding downstream 626255 8127848 ~ 8205393 (-)
esm1 esm1 coding upstream 25440 8857631 ~ 8860067 (-)
LOC110536920 NA coding upstream 183805 9015996 ~ 9022222 (-)
hcn1 hcn1 coding upstream 205445 9018507 ~ 9206417 (-)
LOC110536926 grp coding upstream 729912 9562103 ~ 9564000 (-)
LOC110536932 NA coding upstream 854098 9684834 ~ 9696461 (-)
G1034953 NA non-coding downstream 6165 8825159 ~ 8825483 (-)
G1034947 NA non-coding downstream 10945 8820214 ~ 8820703 (-)
G1034936 NA non-coding downstream 17346 8814074 ~ 8814302 (-)
G1034935 NA non-coding downstream 17724 8813700 ~ 8813924 (-)
G1034931 NA non-coding downstream 18850 8812581 ~ 8812798 (-)
G1035158 NA non-coding upstream 2931 8835122 ~ 8835357 (-)
G1035167 NA non-coding upstream 16863 8849054 ~ 8850091 (-)
G1035168 NA non-coding upstream 19675 8851866 ~ 8852257 (-)
G1035170 NA non-coding upstream 30922 8863113 ~ 8865691 (-)
G1035180 NA non-coding upstream 51370 8883561 ~ 8884749 (-)
G1034667 NA other downstream 551782 8279339 ~ 8279866 (-)
G1034443 yo84 other downstream 997070 7827880 ~ 7834578 (-)
LOC110523118 LOC106572051 other downstream 1049610 7645369 ~ 7821518 (-)
G1032941 NA other downstream 2631314 6197017 ~ 6200334 (-)
G1032314 NA other downstream 3048284 5782940 ~ 5783364 (-)
G1035160 NA other upstream 4065 8836256 ~ 8838834 (-)
G1035717 NA other upstream 701309 9533500 ~ 9548135 (-)
sema4d sema4d other upstream 1073113 9901109 ~ 9983793 (-)

Expression

G1034963 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 6.
End of interactive chart.

G1034963 Expression in each Bioproject

Bar chart with 21 bars.
G1034963 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 150.
End of interactive chart.

Co-expression Network