G1035170


Basic Information

Item Value
gene id G1035170
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 8863113 ~ 8865691 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1179470
attacaaatacaaaatatacgctatatttgtcacatgcgccgaatacaacaggtgtagtagacgttacagtgaaatactgaatacaacaggtgtagtagacctaacagtgaaatgctgaatacaacaggtgtaggtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacagcaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtattagaccttacagtgaaatgctgaatacaacaggtgtattagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtattagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacagctgtattagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacaatgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagacctcacagtgaaatgctgaatacaacaggtgtagtagacctaacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagacctcacagtgaaatgctgaatacaacaggtgtagtagacctcacagtgaaatactgaatacaacaggtgtagtagaccttacagtgaaatactgaatacaacaggtgtagtagaccttacagtgaaatactgaatacaacaggtgtagtagaccttacagtgaaatactgaatacaacaggtgtagtataccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagacctcacagtgaaatactgaatacaacaggtgtagtagacctcacagtgaaatactgaatacaacaggtgtagtagacctcacagtgaaatactgaatacaacaggtgtagtagaccttacagtgaaatactgaatacaacaggtgtagtagaccttacagtgaaatactgaatacaacaggtgtagtataccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatgctgaatacaacaggtgtagtagaccttacagtgaaatactgaatacaacaggtgtagtagaccttacag

Function

NR:

description
PREDICTED: uncharacterized protein LOC106584693 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1179470 True 1439 lncRNA 0.39 4 8863113 8865691

Neighbor

gene id symbol gene type direction distance location
esm1 esm1 coding downstream 3046 8857631 ~ 8860067 (-)
arhgap24 arhgap24 coding downstream 53560 8594329 ~ 8809553 (-)
ptpn13 ptpn13 coding downstream 402442 8291551 ~ 8460671 (-)
LOC118937621 NA coding downstream 574575 8278541 ~ 8288538 (-)
LOC100136343 LOC100136343 coding downstream 610199 8246010 ~ 8252914 (-)
LOC110536920 NA coding upstream 150305 9015996 ~ 9022222 (-)
hcn1 hcn1 coding upstream 171945 9018507 ~ 9206417 (-)
LOC110536926 grp coding upstream 696412 9562103 ~ 9564000 (-)
LOC110536932 NA coding upstream 820598 9684834 ~ 9696461 (-)
nedd4l nedd4l coding upstream 829391 9695082 ~ 9803536 (-)
G1035168 NA non-coding downstream 10856 8851866 ~ 8852257 (-)
G1035167 NA non-coding downstream 13022 8849054 ~ 8850091 (-)
G1035158 NA non-coding downstream 27756 8835122 ~ 8835357 (-)
G1034963 NA non-coding downstream 30922 8831648 ~ 8832191 (-)
G1034953 NA non-coding downstream 37630 8825159 ~ 8825483 (-)
G1035180 NA non-coding upstream 17870 8883561 ~ 8884749 (-)
G1035245 NA non-coding upstream 112156 8977847 ~ 8978047 (-)
G1035246 NA non-coding upstream 112473 8978164 ~ 8978380 (-)
G1035295 NA non-coding upstream 214375 9080066 ~ 9081371 (-)
G1035160 NA other downstream 24279 8836256 ~ 8838834 (-)
G1034667 NA other downstream 583247 8279339 ~ 8279866 (-)
G1034443 yo84 other downstream 1028535 7827880 ~ 7834578 (-)
LOC110523118 LOC106572051 other downstream 1081075 7645369 ~ 7821518 (-)
G1032941 NA other downstream 2662779 6197017 ~ 6200334 (-)
G1035717 NA other upstream 667809 9533500 ~ 9548135 (-)
sema4d sema4d other upstream 1039613 9901109 ~ 9983793 (-)
LOC110536951 cr032 other upstream 1984511 10850171 ~ 10860150 (-)

Expression


Co-expression Network