G1035594


Basic Information

Item Value
gene id G1035594
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 9460518 ~ 9465470 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1180013
cccttctgcagcaaagcacccccacaacatgatgctgccacccctgtgcttcacggttgggatggtgttcttcggcttgcaagcctccccctttttcctccaaacataacgatggtcattatggccgaagagttctatttttgtttcatcagatcagaggacatttttccaaaaagtacgatctttgtccccacgtgcagttgcaaaccgtagtctggctttttaatggcagttttggagcagtggcttcttccttgcagagtggcctttcaggttatgtcgatatagaacttgttttactgtggatatagatacttttgtacctgtttcctccagcatcttcacatggtcctttgctgttgttctgggattgatttgcaattttcacaccaaagtgcgttcatctctaggagacagaacgcatctccttcctgagtggtgtgatggctgcgtggtcccatggtgtttctacttgcgtactattgtttgtacagatgaacgtggtaccatcagacgtttggaaattgctcccaaggaagaaccagacttgtggaggtctgttTTATCCTCctagtaaacctctgttctatcctcctacagtagtaaacctctgtactatcctcctacagtagtaaacctctgttctatcctcctacattagtaaacctctgttctctcctagtaaacctctgttctatcctcctacagtagtaaacctctgttctatcctcctacagtagtaaacctctgttctatcctagtaaacctctgttctctcctagtaaacctctgttctatcctcctagtaaacctctgttctctcctagtaaacctctgttctatcctcctacagtggtaaacctctgttctatcctcctagtaaacctctgttctctcctagtaaacctctgttctatcctcctacagtagtaaacctctgttctatcctcctacattagtaaacctctgttctatcctcctacagtagtaaacctttgttctatcctcctacagtagtaaacctctgttctattctcctagtaaacctctgttctatcctcctacagtagtaaacctctgttctatcctcctacagtagtaaacctctgttctattctcctagtaaacctctgttctatcctcctacagtagtaaacctctgtcctatcctcctacagtagtaaacctctgttctattctcctagtaaacctctgttctatcctcctacagtagtaaacctctgttctatcctcctacagtagtaaacctctgttctatcctcctacagtagtaaacctctgttctatcctcctacagtagtaaacctctgttctattctcctagtaaacctctgttctatcctcctacagtagtaaacctctgttctatcctcctacagtagtaaacctctgttctatcctcctacagtagtaaacctctgttctatcctcctagtaaacctctgttctatcctcctacagtagtaaacctctgttctatcctcctacagtagtaaacctctgttctatcctcctagtaaacctctgttctatcctcctacagtagtaaacctctgttTTATCCTCctagtaaacctctgttctatcctcctacagtagtaaacctctgttctatcctcctacagtagtaaacctctgttctagtctcctagtaaacctctgttctatcctcctacagtagtaaacctctgttctatcctcctacagtagtaaacctctgttctatcctcctagtaaacctctgttatatcctcctacagtagtaaacctctgtcctatcctcctacagtagtaaacctctgttctatcctcctacagtagtaaacctctgttctatcctcctacagtagtaaacctctgttctctcctagtaaacctctgttctatcctcctacagtagtaaacctctgtcctatcctcctacagtagtaaacctctgttatatcctcctacagtagtaaacctctgtcctatcctcctacagtagtaaacctctgttctatcctcctacagtagtaaacctctgttatatcctcctacagtagtaaacctctgttATATCCTCTtacagtagtaaacctctgtcctatcctcctacagtagtaaacctctgttctatcctcctagtaaacctctgttatatcctcctacagtagtaaacctctgttctatcctcctactgtagtaaacctctgttctatcctcctacagtagtaaacctctgttatatcctcctacagtagtaaacctctgttctatcctcctacagtagtaaacctctgttctatccCCCTACAGTAGTAAACCTTTGTTCTATCC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1180013 True 2340 lncRNA 0.42 2 9460518 9465470

Neighbor

gene id symbol gene type direction distance location
hcn1 hcn1 coding downstream 254101 9018507 ~ 9206417 (-)
LOC110536920 NA coding downstream 438296 9015996 ~ 9022222 (-)
esm1 esm1 coding downstream 600451 8857631 ~ 8860067 (-)
arhgap24 arhgap24 coding downstream 650965 8594329 ~ 8809553 (-)
ptpn13 ptpn13 coding downstream 999847 8291551 ~ 8460671 (-)
LOC110536926 grp coding upstream 96633 9562103 ~ 9564000 (-)
LOC110536932 NA coding upstream 220819 9684834 ~ 9696461 (-)
nedd4l nedd4l coding upstream 229612 9695082 ~ 9803536 (-)
dnajc21 dnajc21 coding upstream 411060 9876530 ~ 9887383 (-)
bxdc2 brix1 coding upstream 426133 9891603 ~ 9896872 (-)
G1035536 NA non-coding downstream 638 9459339 ~ 9459880 (-)
G1035578 NA non-coding downstream 27268 9432680 ~ 9433250 (-)
G1035466 NA non-coding downstream 115540 9344186 ~ 9344978 (-)
G1035406 NA non-coding downstream 208539 9250921 ~ 9251979 (-)
G1035401 NA non-coding downstream 213798 9246518 ~ 9246720 (-)
G1035686 NA non-coding upstream 19660 9485130 ~ 9485371 (-)
G1035687 NA non-coding upstream 20688 9486158 ~ 9486465 (-)
G1035688 NA non-coding upstream 21267 9486737 ~ 9487015 (-)
G1035690 NA non-coding upstream 23447 9488917 ~ 9489137 (-)
G1035717 NA non-coding upstream 75009 9533500 ~ 9548135 (-)
G1035160 NA other downstream 621684 8836256 ~ 8838834 (-)
G1034667 NA other downstream 1180652 8279339 ~ 8279866 (-)
G1034443 yo84 other downstream 1625940 7827880 ~ 7834578 (-)
LOC110523118 LOC106572051 other downstream 1678480 7645369 ~ 7821518 (-)
sema4d sema4d other upstream 439834 9901109 ~ 9983793 (-)
LOC110536951 cr032 other upstream 1384732 10850171 ~ 10860150 (-)
G1037216 NA other upstream 1637614 11103084 ~ 11103448 (-)

Expression


Co-expression Network