Gene
RNA
| Item | Value |
|---|---|
| gene id | G1035690 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 9488917 ~ 9489137 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tcb1 transposase |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1180118 | True | 221 | lncRNA | 0.42 | 1 | 9488917 | 9489137 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| hcn1 | hcn1 | coding | downstream | 282500 | 9018507 ~ 9206417 (-) |
| LOC110536920 | NA | coding | downstream | 466695 | 9015996 ~ 9022222 (-) |
| esm1 | esm1 | coding | downstream | 628850 | 8857631 ~ 8860067 (-) |
| arhgap24 | arhgap24 | coding | downstream | 679364 | 8594329 ~ 8809553 (-) |
| ptpn13 | ptpn13 | coding | downstream | 1028246 | 8291551 ~ 8460671 (-) |
| LOC110536926 | grp | coding | upstream | 72966 | 9562103 ~ 9564000 (-) |
| LOC110536932 | NA | coding | upstream | 197152 | 9684834 ~ 9696461 (-) |
| nedd4l | nedd4l | coding | upstream | 205945 | 9695082 ~ 9803536 (-) |
| dnajc21 | dnajc21 | coding | upstream | 387393 | 9876530 ~ 9887383 (-) |
| bxdc2 | brix1 | coding | upstream | 402466 | 9891603 ~ 9896872 (-) |
| G1035688 | NA | non-coding | downstream | 1902 | 9486737 ~ 9487015 (-) |
| G1035687 | NA | non-coding | downstream | 2452 | 9486158 ~ 9486465 (-) |
| G1035686 | NA | non-coding | downstream | 3546 | 9485130 ~ 9485371 (-) |
| G1035594 | NA | non-coding | downstream | 23447 | 9460518 ~ 9465470 (-) |
| G1035536 | NA | non-coding | downstream | 29037 | 9459339 ~ 9459880 (-) |
| G1035717 | NA | non-coding | upstream | 51342 | 9533500 ~ 9548135 (-) |
| G1035723 | NA | non-coding | upstream | 52286 | 9541423 ~ 9542216 (-) |
| G1035736 | NA | non-coding | upstream | 78495 | 9567632 ~ 9568010 (-) |
| G1035881 | alpk2 | non-coding | upstream | 168047 | 9657184 ~ 9667930 (-) |
| G1035160 | NA | other | downstream | 650083 | 8836256 ~ 8838834 (-) |
| G1034667 | NA | other | downstream | 1209051 | 8279339 ~ 8279866 (-) |
| G1034443 | yo84 | other | downstream | 1654339 | 7827880 ~ 7834578 (-) |
| LOC110523118 | LOC106572051 | other | downstream | 1706879 | 7645369 ~ 7821518 (-) |
| sema4d | sema4d | other | upstream | 416167 | 9901109 ~ 9983793 (-) |
| LOC110536951 | cr032 | other | upstream | 1361065 | 10850171 ~ 10860150 (-) |
| G1037216 | NA | other | upstream | 1613947 | 11103084 ~ 11103448 (-) |
