G1035717


Basic Information

Item Value
gene id G1035717
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 9533500 ~ 9548135 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1180145
TTTGTCATTGGCTTCTGCATGAACATGTATAATTCTAACAGCACAACATAACCTTACATTTAATATACATATGTTTTAGAGTAATCCAATATCCTTAACATTAGTACTCCAGTGTGTCAGTCAATGTTAATGTACAGTTTGTTTAATTATGGAATAAAgactatatattttatttaaatgaTGGACTGTGCAAAACCGCAAGAATTTATCTCTTACAGGCGTGTTTTATGCTCGTTGTTTTGGATAAACATTGATAGAGGTGATTTGTCAAAGATGTACtattgtgtgtgtggaggaggataTGCAACAGAATGCATTTTGCAACTGTCCAAAATACTGTCAGTTGAAAAAAAAGTGTAAAAGAAGTGGCCATCATGAGGTGCCATCATTTCCTAATTAACAGATGAAACATGGAGAATAACACAAATTGGGGAGAAACAATCTAAAACAGCATtcattcacacacatacaaaaaaaaTACGTACTTTTACAAGTTAAACAAACAGCAAATTACAGGGAGACTTCAAAACATAAACCGATTCACACAAGAAGTTGTTTGGGAAATTAACTTCCATTTCAGTAAAGACCTGCTACCATTGGATGTCGCCAAGCAGATTTCACAGCTTTGATCATtgatagggggagatagaggactctcttagacctgggttcaaatagtatctgTTTTCTTTCAGCTGAGCTTGATTGAGCTTTTATGGAGCCAATGGAATGCTACCAAAAGTGCAAACCAACTCGGCCCGTCCATCTGGCACTCCCCAGACAGGCTCATTCAAAACACTCAAAGGAGACTTTAAAACAGGGGTACTCAAGTACTAGTTGAGAAGGTCCGGTCAAACAAATGTTCTATGTGGCTAAGGTCCAGATGGATAATGTCATTTATCGGCGTAGTAACGAACCCTACCTCACAACCCATTGgaccccaaactgttcacacccctcttgttggcggagagaaaatgttgcagttttaaagctaatttcctgcagttctacacatttcaCATGGGACAGAGAATTTTGTTGCTATttcaaagctaatttcctgcaattctacacatcttATGTGTGTTTAAATGATACCAGGGGTCAAAGCCCGATCGAGTTCCATTATTTTAACAATAAATAGATGTGGTCCACCAGTTGAGCATAGGAGCTTTAAAATAGCTCAGATACTTATTTTAAACCCAGGTCTGCTGGGTGGAGAGTGGAGATTCTTATAGGATCGGTTTGTTTACAGTCGGTCCTAAAtcactccctttccctcccccttgTTCCCTTACACCTCTATGTTAGCATGTCTAATGGTCTTAATAAGTATAGGCAGTGTGGTGGTACAGCTTCCACCATGTTTTTCCACCTTCAGATCTGCAAACATTGAAGGGTTAGGGCCAAGGGATCGAATCGGGCTAGAATTGGGACCGGCTGTTCATGAAGTGAAATCttccattttatttttattttacatgaCAGAGCATTTCTCCTCTGCCTTGGCTTTCATCTCCGTCACGGTGGCCGAGGCCTTCTCCTTGAGCTGGTCCATGTCCATGTTCTGGAGGTTCTGAATGCCACCCAAGATGGAgtccttgtcctcctcctccgTGGCATCCTCGTCCACCATCTTGAGCAGCTCCTCGGGTACGTCCACGTCGTCTCCAGCCATGGCCAGCATGTTATCGTCCTGCTCGCTCTTTGGGAGTCTGTACTTGTCTCGTAGGCACACCCGCAGAGTTGCCCTCTCAGCTTTCTTGTGTAAGAAGTCGGCATCTCTTTCCATCTTCTCCTCCACCAACTGTTTTTGGTACTCCTCATACTCCTCGCGTGTCATCCCTGCTGCCTTGGCCGGGTCTGCAGGGGCCGCCTccgcttcctcctctcct
>TU1180146
TTTGTCATTGGCTTCTGCATGAACATGTATAATTCTAACAGCACAACATAACCTTACATTTAATATACATATGTTTTAGAGTAATCCAATATCCTTAACATTAGTACTCCAGTGTGTCAGTCAATGTTAATGTACAGTTTGTTTAATTATGGAATAAAgactatatattttatttaaatgaTGGACTGTGCAAAACCGCAAGAATTTATCTCTTACAGGCGTGTTTTATGCTCGTTGTTTTGGATAAACATTGATAGAGGTGATTTGTCAAAGATGTACtattgtgtgtgtggaggaggataTGCAACAGAATGCATTTTGCAACTGTCCAAAATACTGTCAGTTGAAAAAAAAGTGTAAAAGAAGTGGCCATCATGAGGTGCCATCATTTCCTAATTAACAGATGAAACATGGAGAATAACACAAATTGGGGAGAAACAATCTAAAACAGCATtcattcacacacatacaaaaaaaaTACGTACTTTTACAAGTTAAACAAACAGCAAATTACAGGGAGACTTCAAAACATAAACCGATTCACACAAGAAGTTGTTTGGGAAATTAACTTCCATTTCAGTAAAGACCTGCTACCATTGGATGTCGCCAAGCAGATTTCACAGCTTTGATCATtgatagggggagatagaggactctcttagacctgggttcaaatagtatctgTTTTCTTTCAGCTGAGCTTGATTGAGCTTTTATGGAGCCAATGGAATGCTACCAAAAGTGCAAACCAACTCGGCCCGTCCATCTGGCACTCCCCAGACAGGCTCATTCAAAACACTCAAAGGAGACTTTAAAACAGGGGTACTCAAGTACTAGTTGAGAAGGTCCGGTCAAACAAATGTTCTATGTGGCTAAGGTCCAGATGGATAATGTCATTTATCGGCGTAGTAACGAACCCTACCTCACAACCCATTGgaccccaaactgttcacacccctcttgttggcggagagaaaatgttgcagttttaaagctaatttcctgcagttctacacatttcaCATGGGACAGAGAATTTTGTTGCTATttcaaagctaatttcctgcaattctacacatcttATGTGTGTTTAAATGATACCAGGGGTCAAAGCCCGATCGAGTTCCATTATTTTAACAATAAATAGATGTGGTCCACCAGTTGAGCATAGGAGCTTTAAAATAGCTCAGATACTTATTTTAAACCCAGGTCTGCTGGGTGGAGAGTGGAGATTCTTATAGGATCGGTTTGTTTACAGTCGGTCCTAAAtcactccctttccctcccccttgTTCCCTTACACCTCTATGTTAGCATGTCTAATGGTCTTAATAAGTATAGGCAGTGTGGTGGTACAGCTTCCACCATGTTTTTCCACCTTCAGATCTGCAAACATTGAAGGGTTAGGGCCAAGGGATCGAATCGGGCTAGAATTGGGACCGGCTGTTCATGAAGTGAAATCttccattttatttttattttacatgaCAGAGCATTTCTCCTCTGCCTTGGCTTTCATCTCCGTCACGGTGGCCGAGGCCTTCTCCTTGAGCTGGTCCATGTCCATGTTCTGGAGGTTCTGAATGCCACCCAAGATGGAgtccttgtcctcctcctccgTGGCATCCTCGTCCACCATCTTGAGCAGCTCCTCGGGTACGTCCACGTCGTCTCCAGCCATGGCCAGCATGTTATCGTCCTGCTCGCTCTTATTTTCGCTCGTCATAACAACTGGTTAAAAATATCTTCCTTATCAAGCAGCTTTCAATAGATCCAAACAGATTCAGTAGATTATTCTACCGAATCGATCCtagatgtggttgttgtggctGTCAACGTCGCTCAACCAACACTGTCTTCACTCCCCAGAGCCACATTAACACCTAGCAGAGCAGATGGCTTCTGGTCTTGTTTTAAGCCCGCGGCACAATATAGGACACCATGTCAAGTCTCCAG

Function

NR:

description
PREDICTED: complexin-4

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1180145 False 1898 TUCP 0.43 3 9533500 9548135
TU1180146 True 1956 lncRNA 0.42 2 9540479 9548135

Neighbor

gene id symbol gene type direction distance location
hcn1 hcn1 coding downstream 334062 9018507 ~ 9206417 (-)
LOC110536920 NA coding downstream 518257 9015996 ~ 9022222 (-)
esm1 esm1 coding downstream 680412 8857631 ~ 8860067 (-)
arhgap24 arhgap24 coding downstream 730926 8594329 ~ 8809553 (-)
ptpn13 ptpn13 coding downstream 1079808 8291551 ~ 8460671 (-)
LOC110536926 grp coding upstream 13968 9562103 ~ 9564000 (-)
LOC110536932 NA coding upstream 138154 9684834 ~ 9696461 (-)
nedd4l nedd4l coding upstream 146947 9695082 ~ 9803536 (-)
dnajc21 dnajc21 coding upstream 328395 9876530 ~ 9887383 (-)
bxdc2 brix1 coding upstream 343468 9891603 ~ 9896872 (-)
G1035690 NA non-coding downstream 51342 9488917 ~ 9489137 (-)
G1035688 NA non-coding downstream 53464 9486737 ~ 9487015 (-)
G1035687 NA non-coding downstream 54014 9486158 ~ 9486465 (-)
G1035686 NA non-coding downstream 55108 9485130 ~ 9485371 (-)
G1035594 NA non-coding downstream 75009 9460518 ~ 9465470 (-)
G1035736 NA non-coding upstream 19497 9567632 ~ 9568010 (-)
G1035881 alpk2 non-coding upstream 109049 9657184 ~ 9667930 (-)
G1035907 NA non-coding upstream 167167 9715302 ~ 9715589 (-)
G1035913 NA non-coding upstream 183602 9731737 ~ 9732621 (-)
G1035160 NA other downstream 701645 8836256 ~ 8838834 (-)
G1034667 NA other downstream 1260613 8279339 ~ 8279866 (-)
G1034443 yo84 other downstream 1705901 7827880 ~ 7834578 (-)
LOC110523118 LOC106572051 other downstream 1758441 7645369 ~ 7821518 (-)
sema4d sema4d other upstream 357169 9901109 ~ 9983793 (-)
LOC110536951 cr032 other upstream 1302067 10850171 ~ 10860150 (-)
G1037216 NA other upstream 1554949 11103084 ~ 11103448 (-)
G1037217 NA other upstream 1557800 11105935 ~ 11106320 (-)

Expression


Co-expression Network