G1036753


Basic Information

Item Value
gene id G1036753
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 10077008 ~ 10080380 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1181408
CACGGTTTTATTGCCAACAGTCATACAGAATGATGATAACTCATACAACCAAAGACTAAATCTGTAAACATTGTTTGGACTCAtttctttgtttttattttttttttacttgttccaaaatgtgtttttgtggtCCTTCTGACAAAAAGACTCATCATATTCAGAATTTggaaactagagagagagagagagagagagagaaaaatgttgAATCTCAAGCAGCAACACTCAAGCAGTACTGCGAAACACAACTCTTagaatgcGGTGCCAATGGGACGCACGCTAATGAACGGCAGGGCATGCCCATGAAGAAGTTCCAGCTATTGCACTTTGAAGAAGAAAAACACCATTGGTACAAAGAAAAGGCACATTTTCATCAACAGAAATCTGAAAAAGCCATGTTCTAGTGTGACTCCCTACTGTATACATGGGGATGTTGAGTTGACTCACAGTTCTTTGTTGAGCTAACGTAACATTATTTATGCCAAGCTAAGTACTGTAATGGTGTAAGATCGTTTGATTATTTGTTTAAACGTTTGAATAGCATGCGTGGACCTCCAGGATTTGTCCCTAGGAGTTCTGGGGAATCTATTCTTCAGTTATGGTCCTTTCCAAAAAAGTCACTGTACAGATCTGCCAAACCAAATGTATTACCATTCTCTTTTGTCTGTTCATAAACTGCCACAAAAGCAGTGGGCTGTCTGGAAATGTAAACAATCTAGACTAAAATGACATGAAGCTGCTTCAGGCTAGACAGCAACTGTATCATATCTTGATGGGGAGGTTATCATATCATAACATTGCCTTGATCCCCTTTAAAAATCAGAGTAAGACTTATTTAAAAGACAGTTGTTGGAGTAGATTCACGTACACTTCCTCTTGCTGCAAAATACAGGTATCCTACAGTATCGTAAATAACTGTCTTCTTGTCAAACAAATGAACTGGAAACACAGGTTCTGTTTTGGTTCAATCCTAAATACACATCGTTATCTAACAGTGAAATGCATCAGTGTCCCGTTTGTGTCACAGGTTTTTGTTAATGGTCATAATATTTAGTTTCTGTACTTATGCATGAACGTGAGGCTAAAACATATTTTCAGCTTCTCCTCCAAATGGCTGTTTTACCTATGcaattactgtaaaaaaaaaaaaaaagttctaaATATGAATTTGTAAATGATTTAATGTATAGATTTCAAGTGGTTGAATTTAAATACAACTCCAATATtcattattttaattttattacaATGTAATTTCAATAGTTATAACAAATATGTAACATATGCTATATAACATGATAAATATAATTGAACTATTCCTAGTTATGTAAATTCAGTCTAAATGCATAGGTAAAAGGCCAATTTAAATGTTCCATCAGTCAGTTCTTCTGACCATTCTGTGATGTCAATAGACCTATCGAAATCCATACATTGAGAAATGAGAATGAATTTATAGTCAATATTGTTACACAAGAGAAAGTGATGTCATATCCTTATTATCTAATTAAGAGTGCGCTAGGTGAAATCGAGAGGATTTTTCTAAACCTCCCCGTCGGTATAGTGATTTAGGTTAAAACACGTTGGTGAATTGTTCTCAATACAATTAACACAGATCATCTTTTAAACTTCTGATTGTGCTATACATTTGTGATAATAATTTTGTCAAATAAtacacttttaaaaatccactaTAGAGCCATAAACACTAGAAATGATGTGAAGAATATTCATTTGCATGATCGAAGCTCCAAACTAGTTGACTTACTACACACCCAGTTTAAAGAAGGATCCAGAAACCAATTATGAAATAATATTTTGAAAAGcaataaatagttttttttcttatttttttctcttttttttacaGTGTTAGCATTACACAAGTAACTCCCAAGGGGGTTCAAGGTCTATGAACAATGTCCACAGGAACAGTTAGATTTGTCAAGTCATGCGACTGCAGTGACACAAGAAGAGTACTtcattattaaaaaaaatgtcagtGGGTCAATCTCAATAGTGATAACTTGATTCCTCATGCCCCTCCCTCCTTGTTTCCTTCTCAAAGCACATTGGAGCAGAAGATGTGAGGGTCCTCCCCTCGGATCTATATAACCTCATGAAACCAGACTGACCGCTGAGCTTACATTTTGTGAAGTGAAACAGAATGTGACATTGTCACATTTTTaaattgacatttgagtcatttagcagacggtcttatccagagagacttacagttagatCAGTCTGGTTTCATAAGGCTAATGGAAGGTTTTGGGggcaaggagagaggatgcaagGAATCAAGGGAGTACAACTGAGATTCACCCTGTATCTTTAAAGCCATGTTGACAGCACTATGAGGGGCCAAAGGTTGCGACCCCTGACCCCAACACACTGTGACTACTGTAAAGCAAAACACATTCACGTCTTTAGTTCTTATAAAGCAGATTCATTTTTAGCCTGGTCACAGACCCATGTGTGCTGTCTTACCAACTCCTATGGGCTATGGTCATTGTCCCACCCTCAGGTGTTGGCAAGACatcacaaacaggtctgggaccaggataGATGAATTAGTAACCCCAAGGGAAGATGTCGTCGCGCTATAGCTGCGATAAAGGACAAATAATCCTAAAATAGTTTCAATATAAACAACAGCATTTTCAAATAGTTGTTCTCCTCTATGTAAATCCTACTTACCAATGACTGTGTAAATCTGGTTGTGCTTGATAGACAAAACTCAAATTCAGGGTTTTATTCGAAAATACTATTTTCTTTCCCCTCTGATGTCGATTTGCGCTTCGTCATCTAAACTACTAACAGTTGTTTTTCTTTGTCTTTAGAACACCAAATCAACATGTCCCAAATGCACCTATATGTCTTCTCAAAAATATAGCATTTCAATCATCACCAGAAAATAATAACAGTtctataaatattttttatatcaGCAAACCTTCTTCTTTCTCATCCTCCTTTTTTTGTGGCCCGGGAGTTTGCTCAGCCACAGACCAAGACACTGTCATCATCGTTAAGTCACCTTTTTTTTCAACAATAATATATTCTCTATTTTCATCTTCAAGTTTCAGGTTTTCAGGAGGGATTGGAGGTTTAAGTTTCAGAACTCCATCTCCCAGCAGGTTTAGTGAGTGGATCGTCACTATTTCCTGTTGCCCACAGGCTGCTTCAGACAAAGTTCACTTCCTGCTGACACTATGGGCAAGCTGTTGTCACGGTGATGGCCTATCAGGTGACTGATGCTGTCAAATATGTGATCTTTTG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1181408 True 3288 lncRNA 0.37 2 10077008 10080380

Neighbor

gene id symbol gene type direction distance location
zgc:86839 cks2 coding downstream 81493 9989254 ~ 9995515 (-)
sema4d sema4d coding downstream 93215 9901109 ~ 9983793 (-)
rad1 rad1 coding downstream 177387 9897028 ~ 9899621 (-)
bxdc2 brix1 coding downstream 180136 9891603 ~ 9896872 (-)
dnajc21 dnajc21 coding downstream 189625 9876530 ~ 9887383 (-)
LOC110536942 s1pr3 coding upstream 3552 10083932 ~ 10090132 (-)
LOC110536943 LOC106568492 coding upstream 55638 10136018 ~ 10169675 (-)
smad7 LOC106568470 coding upstream 496424 10576804 ~ 10623185 (-)
dym LOC106568469 coding upstream 556240 10636620 ~ 10848489 (-)
LOC110536951 cr032 coding upstream 769791 10850171 ~ 10860150 (-)
G1036739 NA non-coding downstream 31720 10044828 ~ 10045288 (-)
G1036735 NA non-coding downstream 36553 10037761 ~ 10040455 (-)
G1036674 agxt2 non-coding downstream 200723 9869880 ~ 9876285 (-)
G1036670 NA non-coding downstream 212271 9864274 ~ 9864737 (-)
G1036754 NA non-coding upstream 1807 10082187 ~ 10083031 (-)
G1036785 NA non-coding upstream 42278 10122658 ~ 10123398 (-)
G1036830 NA non-coding upstream 125686 10206066 ~ 10206341 (-)
G1036907 NA non-coding upstream 266358 10346738 ~ 10351625 (-)
LOC110536932 NA other downstream 387966 9684834 ~ 9696461 (-)
G1035717 NA other downstream 528873 9533500 ~ 9548135 (-)
hcn1 hcn1 other downstream 1034328 9018507 ~ 9206417 (-)
G1035160 NA other downstream 1238174 8836256 ~ 8838834 (-)
G1037216 NA other upstream 1022704 11103084 ~ 11103448 (-)
G1037217 NA other upstream 1025555 11105935 ~ 11106320 (-)
LOC110536956 LOC106568459 other upstream 1133571 11212672 ~ 11231102 (-)
G1038258 NA other upstream 1525971 11606351 ~ 11615943 (-)

Expression


Co-expression Network