G1037037


Basic Information

Item Value
gene id G1037037
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 10658490 ~ 10659160 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1181736
ACGAGCAGTGGGAAGGGATGGTGGGAAAAGGAGACTGTTAGTTTCGAAGGGGAAGTGGCAGTAGACGAGCATCAGGCCGGCAGCCCCGTGCGGATGCAGATACCCTGccactttttctctctgtctcgttctatctctccctccctttctctgtggAGTCCCAAAGTAGAGATGTCCCCGCTCTCTCTTGATGTGAGGAAATTGGTTTGGATTGTTTTGGAGCTGTGAGTGAAAAGGGGCGTGTGAATTCACATGTAGCACCATGTCCTTTTGTCTGGTGTTCCTTGATCATTCATATGTTTTGTATCCAGGCCAATGGTGCATGTTTACATTGTTTAGATGAGGTTAGATGTTAGAACATGACAAGATGTTGACCTTGACCTTCAGCAAACGGGGTACCTTGAAACTCTGACGTGGACAAAGACATTGTTGGTTGTGCAAAGTGAGAGTGAACGACAGCACGATGTAAAGAAGGGAGGGCTGTAATAGAGCCACTGGGCTCtgttccctccccttctctctgggctctgttccctccctcctccccttctctctgggctctgttccctccctcctccccttctctctcttctctctctcccctccctccctcaatctttccccctctctatcgttctctctctccc

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1181736 True 647 lncRNA 0.51 2 10658490 10659160

Neighbor

gene id symbol gene type direction distance location
smad7 LOC106568470 coding downstream 35305 10576804 ~ 10623185 (-)
LOC110536943 LOC106568492 coding downstream 488815 10136018 ~ 10169675 (-)
LOC110536942 s1pr3 coding downstream 568358 10083932 ~ 10090132 (-)
zgc:86839 cks2 coding downstream 662975 9989254 ~ 9995515 (-)
sema4d sema4d coding downstream 674697 9901109 ~ 9983793 (-)
LOC110536951 cr032 coding upstream 191011 10850171 ~ 10860150 (-)
LOC110536953 LOC106561351 coding upstream 299283 10958443 ~ 10961023 (-)
LOC110536954 LOC106568457 coding upstream 310780 10969940 ~ 10991575 (-)
LOC110536955 LOC106568458 coding upstream 387488 11046648 ~ 11051785 (-)
LOC110536956 LOC106568459 coding upstream 553512 11212672 ~ 11231102 (-)
G1037013 NA non-coding downstream 53238 10604943 ~ 10605252 (-)
G1036979 NA non-coding downstream 71612 10531722 ~ 10586878 (-)
G1037006 NA non-coding downstream 74380 10583806 ~ 10584110 (-)
G1036995 NA non-coding downstream 86761 10569362 ~ 10571729 (-)
G1036986 NA non-coding downstream 110753 10547294 ~ 10547737 (-)
G1037058 NA non-coding upstream 55424 10714584 ~ 10715908 (-)
G1037087 NA non-coding upstream 140852 10800012 ~ 10800419 (-)
G1037113 NA non-coding upstream 195813 10854973 ~ 10855345 (-)
G1037116 NA non-coding upstream 203579 10862739 ~ 10862946 (-)
G1037140 NA non-coding upstream 287201 10946361 ~ 10948639 (-)
LOC110536932 NA other downstream 969448 9684834 ~ 9696461 (-)
G1035717 NA other downstream 1110355 9533500 ~ 9548135 (-)
hcn1 hcn1 other downstream 1615810 9018507 ~ 9206417 (-)
G1035160 NA other downstream 1819656 8836256 ~ 8838834 (-)
G1037216 NA other upstream 443924 11103084 ~ 11103448 (-)
G1037217 NA other upstream 446775 11105935 ~ 11106320 (-)
G1038258 NA other upstream 947191 11606351 ~ 11615943 (-)

Expression


Co-expression Network