Gene
RNA
| Item | Value |
|---|---|
| gene id | G1037142 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 10948735 ~ 10949647 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1181856 | True | 270 | lncRNA | 0.53 | 3 | 10948735 | 10949647 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110536951 | cr032 | coding | downstream | 88585 | 10850171 ~ 10860150 (-) |
| dym | LOC106568469 | coding | downstream | 100246 | 10636620 ~ 10848489 (-) |
| smad7 | LOC106568470 | coding | downstream | 325550 | 10576804 ~ 10623185 (-) |
| LOC110536943 | LOC106568492 | coding | downstream | 779060 | 10136018 ~ 10169675 (-) |
| LOC110536942 | s1pr3 | coding | downstream | 858603 | 10083932 ~ 10090132 (-) |
| LOC110536953 | LOC106561351 | coding | upstream | 8796 | 10958443 ~ 10961023 (-) |
| LOC110536954 | LOC106568457 | coding | upstream | 20293 | 10969940 ~ 10991575 (-) |
| LOC110536955 | LOC106568458 | coding | upstream | 97001 | 11046648 ~ 11051785 (-) |
| LOC110536956 | LOC106568459 | coding | upstream | 263025 | 11212672 ~ 11231102 (-) |
| LOC110536958 | LOC106568460 | coding | upstream | 305512 | 11255159 ~ 11320076 (-) |
| G1037140 | NA | non-coding | downstream | 96 | 10946361 ~ 10948639 (-) |
| G1037116 | NA | non-coding | downstream | 85789 | 10862739 ~ 10862946 (-) |
| G1037113 | NA | non-coding | downstream | 93390 | 10854973 ~ 10855345 (-) |
| G1037087 | NA | non-coding | downstream | 148316 | 10800012 ~ 10800419 (-) |
| G1037058 | NA | non-coding | downstream | 232827 | 10714584 ~ 10715908 (-) |
| G1037156 | NA | non-coding | upstream | 24440 | 10974087 ~ 10974869 (-) |
| G1037205 | NA | non-coding | upstream | 138013 | 11087660 ~ 11088001 (-) |
| G1037206 | NA | non-coding | upstream | 139623 | 11089270 ~ 11094600 (-) |
| G1037215 | NA | non-coding | upstream | 152718 | 11102365 ~ 11102565 (-) |
| G1037224 | NA | non-coding | upstream | 164142 | 11113789 ~ 11114826 (-) |
| sema4d | sema4d | other | downstream | 1038904 | 9901109 ~ 9983793 (-) |
| LOC110536932 | NA | other | downstream | 1259693 | 9684834 ~ 9696461 (-) |
| G1035717 | NA | other | downstream | 1400600 | 9533500 ~ 9548135 (-) |
| hcn1 | hcn1 | other | downstream | 1906055 | 9018507 ~ 9206417 (-) |
| G1037216 | NA | other | upstream | 153437 | 11103084 ~ 11103448 (-) |
| G1037217 | NA | other | upstream | 156288 | 11105935 ~ 11106320 (-) |
| G1038258 | NA | other | upstream | 656704 | 11606351 ~ 11615943 (-) |
| G1038295 | NA | other | upstream | 717340 | 11666987 ~ 11738777 (-) |
