G1038258


Basic Information

Item Value
gene id G1038258
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 11606351 ~ 11615943 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1183218
TTGCATTTTTCTTAATTTTATTGTCACAGAAGCACAATAGGTACCACTATGCAAGATGCACATCAAACTTATAAACAATTttgaatttaaaataaaaataagttcAAAGGAATGCTAGTCCAAATATCCCATCAGACATCACAACACATGTATCCAAACGATGCTCTACAATAATGTTCAGGTATCAAGACAGAAAAGCAAAAGCACTttggatcccccccccccttttttttaagCTTTGTACCAATTCACCCATCATATTACATATTTATCACAAATGCACCCAAACCAGTCACACAAAACAGCATTCACCTGTGCTCTCCAACACACACTTCTAGTCTAAAGAGCTATTATCCAGCCATGAAGTACCAATATCGGGGCAGTTTTTGCTCAAAAGTAATGTTTACACACATCATTACAACATTTTCAGAAGATCGAGTGCCTCTATATCTAAACAATTGTCAGATTAAAAGGTGGGGCTGACGTTTTTTTGTTTTAATCTTAACCAATGAAATAAAAAGATTATATTGAATATAGCCAAATAAATAAAAGCGTATGCTCTTATTTCAATGACTAAGGTATATCTTAGCCAATCAAATTAAAAGTTGGAGTACCCAAGTGTAATTCTGACAACCTGTTTTTGTACATTTAAGAAATAACGACGAGTCCTCCATCTTTTTAGCAACAAGAATAAAGAACAAAAAATAGCAATAGACAATTGATTGATGACAACAAAATTGCAATATTCTCAAAGTCCTTAAAAAACATGGTTCCCTCTGAAGTGTTGAACAAAATACCAACGAAACCGAACTGAAGAATTTAACAAATATCAGCCGAGCTGTGAAACTAGGGGATACACATCCTAATCATCCGCTTCCTTTGACACAAAGCATGGAAGGCTGTAAGCACTTGGGTCAGGTGGTCGATTGGCTGGGGTACAGGAGAGGGTAGGGCATTGGGTAGGGGGCAGGGGTTAGCCTGGATCCAAACTGAAATTGCTCCCTTTCACAACTGCTTCACTTCACAATTGTGGTCATCAGTCTGGCTTTCAGACTTCAGTCTGACTGAACCATCTCTTCATTGAAACTGTTAGTGAGACAATAGCGAAAACGGCAGTTTTCattatttgggatgcaggctaggCATGGCTCTTCCAGAAAGCAGGATCAACGTGTTACTTAGACATCCAACTGTCATAACTAAATATTATGAATTCATTTAATCATTCCTAGAAATATAGACTTTGTATGACTGACTTGACAACCAACAAACCCATTATTGAAGTTAAacttctttttttaaatcaagagaTTTGACTGCTTATCAAAAGTTAACTGGCTAATATGATGATTCTGCTTCCTGGAACACCCCACAGGGGTCAGAGCTAATCCTCGTCGGAGGAAGAGTCCCTGTCGAAGTTGTAGGCCATGAAGAAAACGTCAGGTCGAGGTGGGACAACGGCATGGCCCGGTTTCACTATCTCAAAGCCCAGAAAGCTGAATGTGCGCACAAGTTTAGCACGATCATCTCTGTTCTTGTAAAAGCAGACGAACACGCGGAAAACTTTAAGATCTTCTTCTGCATACTCCAGGAGAGCCGCAAAACTCTCCTTGCTGCCCTCGGGGAGGGGGTCTATGGGTATCTCCACATACAGAGCATTCCCACTCAGCACCGCGTCCCAGTTGATCACCCTGGAAACAGTGAGGCGGCTCTGGAAGTGGAGTATCCCGGGGCGACCGTTCCCCGCCGGCTCCGCTGTCACCGTCAAGTTGGAGTCGAACGGCCGAGATGAAGAAGTGTGATCCCGTTGACCATTACCTCGCCCACCTGGGATCTTCAGGGGTGGGAGAGGGGCATCAGGAGCACCACAGAGGCCCCGGACCACGGGAACTACTACAGTGCAGGGAAAGATTGCCAATCATGTCACAAATACTATTACTTAAATCCGCCATGGTAGTAAAGCACTGTGGTTTTCCTTCTTTCTCGCGAGCAAAGCAATGACTGTTTAAGATCCGCTGGAGGTTGGATTTTACCATCCGGCCTCGGGTAGAGACACGACGGGCTTCTGACTGCTCACTGCAATGGTCGGCTGAGTAATAAAGCCCGATCGGTGCTGAACTCAAGCTAAATGAGCC

Function

NR:

description
LOW QUALITY PROTEIN: ornithine decarboxylase antizyme 2-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1183218 True 2135 TUCP 0.43 5 11606351 11615943

Neighbor

gene id symbol gene type direction distance location
LOC118937665 NA coding downstream 90260 11515387 ~ 11516091 (-)
LOC110536959 LOC106568452 coding downstream 149097 11424257 ~ 11457254 (-)
LOC118937658 NA coding downstream 200266 11404997 ~ 11406085 (-)
LOC110536958 LOC106568460 coding downstream 286275 11255159 ~ 11320076 (-)
LOC110536956 LOC106568459 coding downstream 375249 11212672 ~ 11231102 (-)
LOC110513404 LOC106568437 coding upstream 5390 11621333 ~ 11665670 (-)
LOC110536967 LOC106568438 coding upstream 80708 11696651 ~ 11699966 (-)
LOC110536968 LOC106568439 coding upstream 135792 11751735 ~ 11842433 (-)
LOC110536971 pdl1 coding upstream 239831 11855774 ~ 11861283 (-)
LOC110536972 LOC106568442 coding upstream 275427 11891370 ~ 11961207 (-)
G1038188 NA non-coding downstream 73921 11478682 ~ 11532430 (-)
G1038171 NA non-coding downstream 159717 11442983 ~ 11446634 (-)
G1038157 NA non-coding downstream 195098 11409000 ~ 11411253 (-)
G1037445 NA non-coding downstream 275687 11330237 ~ 11330664 (-)
G1037443 NA non-coding downstream 281923 11324170 ~ 11324428 (-)
G1038330 NA non-coding upstream 104281 11720224 ~ 11720543 (-)
G1038360 NA non-coding upstream 172279 11788222 ~ 11788762 (-)
G1038440 NA non-coding upstream 325251 11941194 ~ 11941523 (-)
LOC110536975 NA non-coding upstream 377356 11973329 ~ 12004830 (-)
G1037217 NA other downstream 500031 11105935 ~ 11106320 (-)
G1037216 NA other downstream 502903 11103084 ~ 11103448 (-)
LOC110536951 cr032 other downstream 746269 10850171 ~ 10860150 (-)
sema4d sema4d other downstream 1696520 9901109 ~ 9983793 (-)
G1038295 NA other upstream 51044 11666987 ~ 11738777 (-)
G1038606 NA other upstream 673581 12289524 ~ 12292538 (-)
G1038943 NA other upstream 1104558 12720501 ~ 12721154 (-)
G1039364 NA other upstream 1531715 13147658 ~ 13176443 (-)
G1039366 NA other upstream 1535078 13151021 ~ 13152307 (-)

Expression


Co-expression Network