G1038295


Basic Information

Item Value
gene id G1038295
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 11666987 ~ 11738777 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1183262
taataccccataatgacaaagcaaaaacagttttttagaaatgtttgcatatttataaaacatttaataacttaaaaatcacatttacatatttattcagaccctttactcagtactttgttgaagcacctttggcagtgattacagcctcgagtcttcttgggtatggcactacaagcttggcacaactgtatttggagagtttctcccattcttctctgcagatcctctcaagctctgtcaggttggatggggagcgttgctgcacagatattttcaggtttccagagatgtttgatcggattGAATTTGGGCTCTGGTTGGggccacaaggacattcagagacttgtcccgaagacactcctgtgttgtgttggctgtgtgcttagggtcattctcctgttggaaggtgaacctcctgagcgctctgaagcaggttttcatcaaggatctctttgtactttgctccgctcatctttgcctcgatcctgactagtctcccagtccctgccactgacaaacctccccagagcatgatggtgccaccaccatgcttcaccaaagggatggtgccaggtttcctccagacgtgaagcttggcattcaggccaaagagttcaatcttggtttcatcagaccagagaatcttgtttcttatggtcagagtcctttaggtgccttttggcaaactccaagtatgcaccttttactgaagagtggcttccgtctgaccactctaccataaaggcctgattggtgtagtgctgcagagatggttgtccttctggaagtttctcccatctccacagaggaactctggagctctgtcagagtgaccatcaggttcttggtcacctccccgaccaaggcccttctcccccgattgctcagtttggccgggcggtcagctcttggaagagtcttggtggttgtaaacttcttccatttaaagaatgatggaggccactgtgttcttggtagcctttcccagatctgtgcctcgacacaatcatgtctcggagctctacggacaattccttcaacatcatggcattgtttttgctctgacatgcactgtcaactgtgggaccttatatatagacaggtgtgtgcctttccaaatcatgtccaattaattggatttaccacaggtgggctctaatcaagttggagaaacatcttaaggatgatcaattgaaacaggatgcaccggagctcaattttgagtctcatagcaaagggtctgaatacttatgtaaataaggtatttctgtttttttatttttaatacatttgctaacatttctaaaaacctgctttcacttt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1183262 True 1326 TUCP 0.45 2 11666987 11738777

Neighbor

gene id symbol gene type direction distance location
LOC110513404 LOC106568437 coding downstream 1317 11621333 ~ 11665670 (-)
LOC118937665 NA coding downstream 150896 11515387 ~ 11516091 (-)
LOC110536959 LOC106568452 coding downstream 209733 11424257 ~ 11457254 (-)
LOC118937658 NA coding downstream 260902 11404997 ~ 11406085 (-)
LOC110536958 LOC106568460 coding downstream 346911 11255159 ~ 11320076 (-)
LOC110536968 LOC106568439 coding upstream 12958 11751735 ~ 11842433 (-)
LOC110536971 pdl1 coding upstream 116997 11855774 ~ 11861283 (-)
LOC110536972 LOC106568442 coding upstream 152593 11891370 ~ 11961207 (-)
LOC110536975 NA coding upstream 234552 11973329 ~ 12004830 (-)
LOC110536978 LOC106568447 coding upstream 280660 12019437 ~ 12034884 (-)
G1038188 NA non-coding downstream 134557 11478682 ~ 11532430 (-)
G1038171 NA non-coding downstream 220353 11442983 ~ 11446634 (-)
G1038157 NA non-coding downstream 255734 11409000 ~ 11411253 (-)
G1037445 NA non-coding downstream 336323 11330237 ~ 11330664 (-)
G1037443 NA non-coding downstream 342559 11324170 ~ 11324428 (-)
G1038360 NA non-coding upstream 49445 11788222 ~ 11788762 (-)
G1038440 NA non-coding upstream 202417 11941194 ~ 11941523 (-)
G1038456 NA non-coding upstream 266460 12005237 ~ 12005560 (-)
G1038258 NA other downstream 51044 11606351 ~ 11615943 (-)
LOC110536956 LOC106568459 other downstream 436155 11212672 ~ 11231102 (-)
G1037217 NA other downstream 560667 11105935 ~ 11106320 (-)
G1037216 NA other downstream 563539 11103084 ~ 11103448 (-)
LOC110536951 cr032 other downstream 806905 10850171 ~ 10860150 (-)
G1038606 NA other upstream 550747 12289524 ~ 12292538 (-)
G1038943 NA other upstream 981724 12720501 ~ 12721154 (-)
G1039364 NA other upstream 1408881 13147658 ~ 13176443 (-)
G1039366 NA other upstream 1412244 13151021 ~ 13152307 (-)
LOC110536986 LOC106568381 other upstream 1582433 13321118 ~ 13324415 (-)

Expression


Co-expression Network