G1038456


Basic Information

Item Value
gene id G1038456
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 12005237 ~ 12005560 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1183444
TTTTGTCATTCAACAAGAGACAACTTGTTTtcaggtatgtatgtatgtttaagTCAGCGAGTGAAGTCGGGGGAGGTGCATCCAGTGATGCCAAtttagcaattttgttgctagatttagcaacttttcagactACTCTGGCAACTTTTTTTTTCAAACAGCACCTAACAAATTgagctacttttaaaaatgtatttggaacttttagcaacttttgaaaagtgactcaaacgctaaaatgcacgcattttccatctaaatgacacaaaaacgtttctctgtcacacactgtcacaacACACGTGCCTAGCTGCAAACGTGCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1183444 True 324 lncRNA 0.38 1 12005237 12005560

Neighbor

gene id symbol gene type direction distance location
LOC110536975 NA coding downstream 407 11973329 ~ 12004830 (-)
LOC110536972 LOC106568442 coding downstream 44030 11891370 ~ 11961207 (-)
LOC110536971 pdl1 coding downstream 143954 11855774 ~ 11861283 (-)
LOC110536968 LOC106568439 coding downstream 162804 11751735 ~ 11842433 (-)
LOC110536967 LOC106568438 coding downstream 305271 11696651 ~ 11699966 (-)
LOC110536978 LOC106568447 coding upstream 13877 12019437 ~ 12034884 (-)
ambp ambp coding upstream 139326 12144886 ~ 12149201 (-)
LOC110536982 LOC106568426 coding upstream 160155 12165715 ~ 12195453 (-)
LOC110536783 LOC106568425 coding upstream 242232 12247792 ~ 12282813 (-)
LOC110536785 LOC106568423 coding upstream 497499 12503059 ~ 12522639 (-)
G1038440 NA non-coding downstream 63714 11941194 ~ 11941523 (-)
G1038360 NA non-coding downstream 216475 11788222 ~ 11788762 (-)
G1038330 NA non-coding downstream 284694 11720224 ~ 11720543 (-)
G1038500 NA non-coding upstream 69923 12075483 ~ 12075950 (-)
G1038527 NA non-coding upstream 94563 12100123 ~ 12100626 (-)
G1038531 NA non-coding upstream 96808 12102368 ~ 12102678 (-)
G1038533 NA non-coding upstream 108280 12113840 ~ 12114101 (-)
G1038295 NA other downstream 266460 11666987 ~ 11738777 (-)
G1038258 NA other downstream 389294 11606351 ~ 11615943 (-)
LOC110536956 LOC106568459 other downstream 774405 11212672 ~ 11231102 (-)
G1037217 NA other downstream 898917 11105935 ~ 11106320 (-)
G1037216 NA other downstream 901789 11103084 ~ 11103448 (-)
G1038606 NA other upstream 283964 12289524 ~ 12292538 (-)
G1038943 NA other upstream 714941 12720501 ~ 12721154 (-)
G1039364 NA other upstream 1142098 13147658 ~ 13176443 (-)
G1039366 NA other upstream 1145461 13151021 ~ 13152307 (-)
LOC110536986 LOC106568381 other upstream 1315650 13321118 ~ 13324415 (-)

Expression


Co-expression Network