Gene
RNA
| Item | Value |
|---|---|
| gene id | G1039843 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 13520030 ~ 13520304 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1185029 | True | 275 | lncRNA | 0.41 | 1 | 13520030 | 13520304 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118937626 | rbm18 | coding | downstream | 22837 | 13467032 ~ 13497193 (-) |
| LOC110536992 | lhx6 | coding | downstream | 53152 | 13442516 ~ 13466878 (-) |
| LOC110536990 | LOC106568384 | coding | downstream | 97040 | 13418214 ~ 13422990 (-) |
| LOC110536988 | LOC106568382 | coding | downstream | 165369 | 13335801 ~ 13354661 (-) |
| LOC110536986 | LOC106568381 | coding | downstream | 195615 | 13321118 ~ 13324415 (-) |
| LOC110536995 | LOC106568389 | coding | upstream | 971 | 13521275 ~ 13554757 (-) |
| paqr3b | LOC106568390 | coding | upstream | 45919 | 13566223 ~ 13571020 (-) |
| LOC110536997 | LOC106568391 | coding | upstream | 58417 | 13578721 ~ 13592519 (-) |
| LOC110537000 | LOC106568392 | coding | upstream | 75386 | 13595690 ~ 13611484 (-) |
| LOC110537001 | LOC106568395 | coding | upstream | 141164 | 13661468 ~ 13666755 (-) |
| G1039824 | NA | non-coding | downstream | 25551 | 13494179 ~ 13494479 (-) |
| G1039501 | NA | non-coding | downstream | 171431 | 13346759 ~ 13348599 (-) |
| G1039426 | NA | non-coding | downstream | 245645 | 13274150 ~ 13274385 (-) |
| G1039422 | NA | non-coding | downstream | 246883 | 13272904 ~ 13273147 (-) |
| G1039254 | NA | non-coding | downstream | 282396 | 13236131 ~ 13237634 (-) |
| G1039846 | NA | non-coding | upstream | 3390 | 13523694 ~ 13523938 (-) |
| G1039848 | NA | non-coding | upstream | 4621 | 13524925 ~ 13525141 (-) |
| G1039851 | NA | non-coding | upstream | 9280 | 13529584 ~ 13534446 (-) |
| G1039871 | NA | non-coding | upstream | 82394 | 13602698 ~ 13607010 (-) |
| G1039504 | NA | other | downstream | 164235 | 13355300 ~ 13355795 (-) |
| G1039364 | NA | other | downstream | 343587 | 13147658 ~ 13176443 (-) |
| G1039366 | NA | other | downstream | 367723 | 13151021 ~ 13152307 (-) |
| G1038943 | NA | other | downstream | 798876 | 12720501 ~ 12721154 (-) |
| G1040300 | NA | other | upstream | 658354 | 14178658 ~ 14180141 (-) |
| G1040432 | LOC106568413 | other | upstream | 787296 | 14307600 ~ 14311052 (-) |
| G1042500 | NA | other | upstream | 2583859 | 16104163 ~ 16104883 (-) |
| LOC110537059 | LOC106568318 | other | upstream | 2804659 | 16324956 ~ 16328168 (-) |
| LOC110537061 | LOC106568319 | other | upstream | 3013313 | 16417638 ~ 16549073 (-) |
