Gene
RNA
| Item | Value |
|---|---|
| gene id | G1040300 |
| gene name | NA |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 14178658 ~ 14180141 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1185574 | True | 1484 | TUCP | 0.36 | 1 | 14178658 | 14180141 |
14,174,800
14,175,200
14,175,600
14,176,000
14,176,400
14,176,800
14,177,200
14,177,600
14,178,000
14,178,400
14,178,800
14,179,200
14,179,600
14,180,000
14,180,400
14,180,800
14,181,200
14,181,600
NC_048576.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110537010 | LOC106568408 | coding | downstream | 23330 | 14120153 ~ 14155328 (-) |
| plpp1a | plpp1 | coding | downstream | 70464 | 14083339 ~ 14108194 (-) |
| dhx29 | dhx29 | coding | downstream | 162105 | 13991357 ~ 14016553 (-) |
| LOC110537005 | LOC106568400 | coding | downstream | 291523 | 13811384 ~ 13887135 (-) |
| LOC110537004 | LOC106568399 | coding | downstream | 371754 | 13766381 ~ 13806904 (-) |
| LOC110537014 | LOC106568411 | coding | upstream | 262 | 14180403 ~ 14198027 (-) |
| zmp:0000001301 | LOC106568410 | coding | upstream | 18017 | 14198158 ~ 14213576 (-) |
| tdgf1 | LOC106568419 | coding | upstream | 69769 | 14249910 ~ 14252948 (-) |
| LOC110537020 | LOC106568373 | coding | upstream | 649480 | 14829621 ~ 14831545 (-) |
| c3ar1 | c3ar1 | coding | upstream | 689598 | 14869739 ~ 14875572 (-) |
| G1040292 | NA | non-coding | downstream | 99969 | 14070953 ~ 14078689 (-) |
| G1040283 | NA | non-coding | downstream | 155193 | 14023034 ~ 14023465 (-) |
| G1040282 | NA | non-coding | downstream | 155992 | 14021555 ~ 14022666 (-) |
| G1040094 | NA | non-coding | downstream | 192245 | 13986092 ~ 13986413 (-) |
| G1040090 | NA | non-coding | downstream | 194856 | 13983506 ~ 13983802 (-) |
| G1040383 | NA | non-coding | upstream | 31954 | 14212095 ~ 14242009 (-) |
| G1040424 | NA | non-coding | upstream | 111793 | 14291934 ~ 14292138 (-) |
| G1040442 | NA | non-coding | upstream | 138220 | 14318361 ~ 14318603 (-) |
| G1040479 | NA | non-coding | upstream | 161415 | 14341556 ~ 14341809 (-) |
| G1040494 | NA | non-coding | upstream | 184350 | 14364491 ~ 14364840 (-) |
| G1039504 | NA | other | downstream | 822863 | 13355300 ~ 13355795 (-) |
| LOC110536986 | LOC106568381 | other | downstream | 855942 | 13321118 ~ 13324415 (-) |
| G1039364 | NA | other | downstream | 1002215 | 13147658 ~ 13176443 (-) |
| G1039366 | NA | other | downstream | 1026351 | 13151021 ~ 13152307 (-) |
| G1038943 | NA | other | downstream | 1457504 | 12720501 ~ 12721154 (-) |
| G1040432 | LOC106568413 | other | upstream | 127459 | 14307600 ~ 14311052 (-) |
| G1042500 | NA | other | upstream | 1924022 | 16104163 ~ 16104883 (-) |
| LOC110537059 | LOC106568318 | other | upstream | 2144822 | 16324956 ~ 16328168 (-) |
| LOC110537061 | LOC106568319 | other | upstream | 2353476 | 16417638 ~ 16549073 (-) |
| LOC110537077 | LOC106568284 | other | upstream | 2885180 | 17065241 ~ 17068020 (-) |
