Gene
RNA
| Item | Value |
|---|---|
| gene id | G1040494 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 14364491 ~ 14364840 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106574524 isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1185775 | True | 350 | lncRNA | 0.35 | 1 | 14364491 | 14364840 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| tdgf1 | LOC106568419 | coding | downstream | 111543 | 14249910 ~ 14252948 (-) |
| zmp:0000001301 | LOC106568410 | coding | downstream | 150915 | 14198158 ~ 14213576 (-) |
| LOC110537014 | LOC106568411 | coding | downstream | 166464 | 14180403 ~ 14198027 (-) |
| LOC110537010 | LOC106568408 | coding | downstream | 209163 | 14120153 ~ 14155328 (-) |
| plpp1a | plpp1 | coding | downstream | 256297 | 14083339 ~ 14108194 (-) |
| LOC110537020 | LOC106568373 | coding | upstream | 464781 | 14829621 ~ 14831545 (-) |
| c3ar1 | c3ar1 | coding | upstream | 504899 | 14869739 ~ 14875572 (-) |
| LOC110537021 | LOC106568367 | coding | upstream | 531508 | 14896348 ~ 14946975 (-) |
| LOC110537023 | NA | coding | upstream | 705232 | 15070072 ~ 15075473 (-) |
| LOC110537026 | LOC106568365 | coding | upstream | 721077 | 15085917 ~ 15096696 (-) |
| G1040479 | NA | non-coding | downstream | 22682 | 14341556 ~ 14341809 (-) |
| G1040442 | NA | non-coding | downstream | 45888 | 14318361 ~ 14318603 (-) |
| G1040424 | NA | non-coding | downstream | 72353 | 14291934 ~ 14292138 (-) |
| G1040383 | NA | non-coding | downstream | 122482 | 14212095 ~ 14242009 (-) |
| G1040292 | NA | non-coding | downstream | 285802 | 14070953 ~ 14078689 (-) |
| G1040509 | NA | non-coding | upstream | 11022 | 14375862 ~ 14376089 (-) |
| G1040534 | NA | non-coding | upstream | 24763 | 14389603 ~ 14389823 (-) |
| G1040593 | NA | non-coding | upstream | 61629 | 14426469 ~ 14427273 (-) |
| G1040597 | NA | non-coding | upstream | 66880 | 14431720 ~ 14431933 (-) |
| G1040863 | NA | non-coding | upstream | 126434 | 14491274 ~ 14514588 (-) |
| G1040432 | LOC106568413 | other | downstream | 53439 | 14307600 ~ 14311052 (-) |
| G1040300 | NA | other | downstream | 184350 | 14178658 ~ 14180141 (-) |
| G1039504 | NA | other | downstream | 1008696 | 13355300 ~ 13355795 (-) |
| LOC110536986 | LOC106568381 | other | downstream | 1041775 | 13321118 ~ 13324415 (-) |
| G1039366 | NA | other | downstream | 1212184 | 13151021 ~ 13152307 (-) |
| G1042500 | NA | other | upstream | 1739323 | 16104163 ~ 16104883 (-) |
| LOC110537059 | LOC106568318 | other | upstream | 1960123 | 16324956 ~ 16328168 (-) |
| LOC110537061 | LOC106568319 | other | upstream | 2168777 | 16417638 ~ 16549073 (-) |
| LOC110537077 | LOC106568284 | other | upstream | 2700481 | 17065241 ~ 17068020 (-) |
| G1044482 | NA | other | upstream | 3331289 | 17696129 ~ 17697105 (-) |
