G1041859



Basic Information


Item Value
gene id G1041859
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 14939792 ~ 14941546 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1187281
gaaatatgagccttaggtcaaatggtagaatctggaaactatcatctcgaaaacaagacgtttattctttcagtgaaatacggaaccgtttcttattttatctaatgggtggcatccctaagtctaaatattcctgttacattgcacaaccttcaatgttatgtcataattacgtaaaattctggcaaattgggcagcccaaactgttgcatatacactgactctgcgtgcaatgaacgcaagagaagtgacacaatttcacctggttaatattgcctgctaacctggatttcttttagctaaatatgcaggtttaaaaaatatatacttctgtgtattgattttaagaaatgcattgatgtttatggttaggtacacattggag

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1187281 True 385 lncRNA 0.36 2 14939792 14941546

Neighbor


gene id symbol gene type direction distance location
c3ar1 c3ar1 coding downstream 64220 14869739 ~ 14875572 (-)
LOC110537020 LOC106568373 coding downstream 108247 14829621 ~ 14831545 (-)
tdgf1 LOC106568419 coding downstream 686844 14249910 ~ 14252948 (-)
zmp:0000001301 LOC106568410 coding downstream 726216 14198158 ~ 14213576 (-)
LOC110537014 LOC106568411 coding downstream 741765 14180403 ~ 14198027 (-)
LOC110537023 NA coding upstream 128526 15070072 ~ 15075473 (-)
LOC110537026 LOC106568365 coding upstream 144371 15085917 ~ 15096696 (-)
LOC110537025 dab2 coding upstream 157998 15099544 ~ 15114328 (-)
LOC110537028 LOC106568361 coding upstream 210463 15152009 ~ 15154387 (-)
LOC110536797 LOC107675342 coding upstream 395973 15337519 ~ 15339341 (-)
G1041831 NA non-coding downstream 62256 14877244 ~ 14877536 (-)
G1041138 NA non-coding downstream 78666 14860617 ~ 14861126 (-)
G1041132 NA non-coding downstream 82894 14856671 ~ 14856898 (-)
G1041131 NA non-coding downstream 83514 14856052 ~ 14856278 (-)
G1041049 NA non-coding downstream 145604 14793947 ~ 14794188 (-)
G1041866 NA non-coding upstream 6938 14948484 ~ 14948692 (-)
G1041871 NA non-coding upstream 12203 14953749 ~ 14953986 (-)
G1041895 NA non-coding upstream 51214 14992760 ~ 15038648 (-)
G1041932 LOC100136130 non-coding upstream 111678 15053224 ~ 15138711 (-)
G1040432 LOC106568413 other downstream 628740 14307600 ~ 14311052 (-)
G1040300 NA other downstream 759651 14178658 ~ 14180141 (-)
G1039504 NA other downstream 1583997 13355300 ~ 13355795 (-)
LOC110536986 LOC106568381 other downstream 1617076 13321118 ~ 13324415 (-)
G1039366 NA other downstream 1787485 13151021 ~ 13152307 (-)
G1042500 NA other upstream 1162617 16104163 ~ 16104883 (-)
LOC110537059 LOC106568318 other upstream 1383417 16324956 ~ 16328168 (-)
LOC110537061 LOC106568319 other upstream 1592071 16417638 ~ 16549073 (-)
LOC110537077 LOC106568284 other upstream 2123775 17065241 ~ 17068020 (-)
G1044482 NA other upstream 2754583 17696129 ~ 17697105 (-)

Expression



Co-expression Network