G1041871



Basic Information


Item Value
gene id G1041871
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 14953749 ~ 14953986 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1187293
GTTCTACCCCAGCTGTCATGAAAGGAATATTGACTTTGTTCTTGATGTTTTCAACAACAAGGGTAATATTCTCACATATGAACAATTTATAACATTGGAAgagtttccaatacctttcagagagtttatttctgtgatcaaagCCGTTCCCAGTGGTCTAACTACACTAATGAAAACTCATCTTAGCTTTGGTAATGATTTCAAAATTTATCCAGAACTCAGATTGGAAGGCGTGGGC

Function


NR:

description
PREDICTED: uncharacterized protein LOC107372402

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1187293 True 238 lncRNA 0.37 1 14953749 14953986

Neighbor


gene id symbol gene type direction distance location
LOC110537021 LOC106568367 coding downstream 6774 14896348 ~ 14946975 (-)
c3ar1 c3ar1 coding downstream 78177 14869739 ~ 14875572 (-)
LOC110537020 LOC106568373 coding downstream 122204 14829621 ~ 14831545 (-)
tdgf1 LOC106568419 coding downstream 700801 14249910 ~ 14252948 (-)
zmp:0000001301 LOC106568410 coding downstream 740173 14198158 ~ 14213576 (-)
LOC110537023 NA coding upstream 116086 15070072 ~ 15075473 (-)
LOC110537026 LOC106568365 coding upstream 131931 15085917 ~ 15096696 (-)
LOC110537025 dab2 coding upstream 145558 15099544 ~ 15114328 (-)
LOC110537028 LOC106568361 coding upstream 198023 15152009 ~ 15154387 (-)
LOC110536797 LOC107675342 coding upstream 383533 15337519 ~ 15339341 (-)
G1041866 NA non-coding downstream 5057 14948484 ~ 14948692 (-)
G1041859 NA non-coding downstream 12203 14939792 ~ 14941546 (-)
G1041831 NA non-coding downstream 76213 14877244 ~ 14877536 (-)
G1041138 NA non-coding downstream 92623 14860617 ~ 14861126 (-)
G1041132 NA non-coding downstream 96851 14856671 ~ 14856898 (-)
G1041895 NA non-coding upstream 38774 14992760 ~ 15038648 (-)
G1041932 LOC100136130 non-coding upstream 99238 15053224 ~ 15138711 (-)
G1041934 NA non-coding upstream 122417 15076403 ~ 15079294 (-)
G1041979 NA non-coding upstream 224579 15178565 ~ 15313769 (-)
G1040432 LOC106568413 other downstream 642697 14307600 ~ 14311052 (-)
G1040300 NA other downstream 773608 14178658 ~ 14180141 (-)
G1039504 NA other downstream 1597954 13355300 ~ 13355795 (-)
LOC110536986 LOC106568381 other downstream 1631033 13321118 ~ 13324415 (-)
G1039366 NA other downstream 1801442 13151021 ~ 13152307 (-)
G1042500 NA other upstream 1150177 16104163 ~ 16104883 (-)
LOC110537059 LOC106568318 other upstream 1370977 16324956 ~ 16328168 (-)
LOC110537061 LOC106568319 other upstream 1579631 16417638 ~ 16549073 (-)
LOC110537077 LOC106568284 other upstream 2111335 17065241 ~ 17068020 (-)
G1044482 NA other upstream 2742143 17696129 ~ 17697105 (-)

Expression



Co-expression Network