G1042097


Basic Information

Item Value
gene id G1042097
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 15393894 ~ 15394565 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1187556
GCTGTTACTTTGTTTGCTGACGCTGTtactgtctcgttccatgtccgttcattattaaatgtttgactccccgtgcCTGCTTCATCACTCCAGTGTCATCCATGTGACAAATGGTTTGaagaagaatgcaaaaacctaagaaagaaattaagaaacctatccaaccaaaaacagagaCCAAGAAAACTTGAGCCTTCCTTATGGTGAATAACTAaagcaatacagaaatacactacggagaaagaaggaacagcacgtcagaaatcagctcaaggtaattgaagaatccatagaatctaaccacttctgggaaaattggaaaacactaagaAATAAAAAGAAAttagaaataaataaaagtaacaaataatgaaagagcagcagtaaaataaccatagcgaggccatatacagggggtaccggtgcagagtcaatgtgcggggggaccggttagtcgaggtaattgaggtaatatgtacatgtaggtagagttattaaagtgactatgcatagataataaacagagtagcagcagcgtaaaagagggagggggacatgcaaatagtctgggaggccatttgattagctgttcaggggtcttatagcttgggggtagaagctctttagaagcctcttggacctagacttggtgctccggtaccgtaATAGAGA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1187556 True 672 lncRNA 0.41 1 15393894 15394565

Neighbor

gene id symbol gene type direction distance location
LOC110537036 LOC106568354 coding downstream 11951 15364686 ~ 15381943 (-)
LOC110537035 LOC106568356 coding downstream 31107 15344920 ~ 15362787 (-)
LOC110536797 LOC107675342 coding downstream 54553 15337519 ~ 15339341 (-)
LOC110537028 LOC106568361 coding downstream 239507 15152009 ~ 15154387 (-)
LOC110537025 dab2 coding downstream 279566 15099544 ~ 15114328 (-)
LOC110537037 LOC106568353 coding upstream 14426 15408991 ~ 15449896 (-)
prune2 LOC106568351 coding upstream 184510 15579075 ~ 15596603 (-)
LOC110537042 LOC106568350 coding upstream 205085 15599650 ~ 15611463 (-)
LOC110537041 LOC106568348 coding upstream 219893 15614458 ~ 15644688 (-)
LOC110536798 LOC106568347 coding upstream 252295 15646860 ~ 15658960 (-)
G1042075 NA non-coding downstream 63924 15329731 ~ 15329970 (-)
G1042074 LOC100135965 non-coding downstream 65808 15324011 ~ 15328086 (-)
G1042072 NA non-coding downstream 70834 15322771 ~ 15323060 (-)
G1042069 NA non-coding downstream 76813 15316872 ~ 15317081 (-)
G1041979 NA non-coding downstream 80125 15178565 ~ 15313769 (-)
G1042101 NA non-coding upstream 202 15394767 ~ 15394966 (-)
G1042102 NA non-coding upstream 1525 15396090 ~ 15396297 (-)
G1042104 NA non-coding upstream 3694 15398259 ~ 15398522 (-)
G1042105 NA non-coding upstream 4137 15398702 ~ 15399066 (-)
G1042106 NA non-coding upstream 4644 15399209 ~ 15399410 (-)
G1040432 LOC106568413 other downstream 1082842 14307600 ~ 14311052 (-)
G1040300 NA other downstream 1213753 14178658 ~ 14180141 (-)
G1039504 NA other downstream 2038099 13355300 ~ 13355795 (-)
LOC110536986 LOC106568381 other downstream 2071178 13321118 ~ 13324415 (-)
G1039366 NA other downstream 2241587 13151021 ~ 13152307 (-)
G1042500 NA other upstream 709598 16104163 ~ 16104883 (-)
LOC110537059 LOC106568318 other upstream 930398 16324956 ~ 16328168 (-)
LOC110537061 LOC106568319 other upstream 1139052 16417638 ~ 16549073 (-)
LOC110537077 LOC106568284 other upstream 1670756 17065241 ~ 17068020 (-)
G1044482 NA other upstream 2301564 17696129 ~ 17697105 (-)

Expression


Co-expression Network