Gene
RNA
| Item | Value |
|---|---|
| gene id | G1042179 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 15511196 ~ 15543997 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1187649 | True | 219 | lncRNA | 0.39 | 2 | 15511196 | 15543997 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110537037 | LOC106568353 | coding | downstream | 61300 | 15408991 ~ 15449896 (-) |
| LOC110537036 | LOC106568354 | coding | downstream | 129253 | 15364686 ~ 15381943 (-) |
| LOC110537035 | LOC106568356 | coding | downstream | 148409 | 15344920 ~ 15362787 (-) |
| LOC110536797 | LOC107675342 | coding | downstream | 171855 | 15337519 ~ 15339341 (-) |
| LOC110537028 | LOC106568361 | coding | downstream | 356809 | 15152009 ~ 15154387 (-) |
| prune2 | LOC106568351 | coding | upstream | 35078 | 15579075 ~ 15596603 (-) |
| LOC110537042 | LOC106568350 | coding | upstream | 55653 | 15599650 ~ 15611463 (-) |
| LOC110537041 | LOC106568348 | coding | upstream | 70461 | 15614458 ~ 15644688 (-) |
| LOC110536798 | LOC106568347 | coding | upstream | 102863 | 15646860 ~ 15658960 (-) |
| LOC110537046 | NA | coding | upstream | 141266 | 15685263 ~ 15706397 (-) |
| G1042175 | NA | non-coding | downstream | 6327 | 15504369 ~ 15504869 (-) |
| G1042150 | NA | non-coding | downstream | 13244 | 15497500 ~ 15497952 (-) |
| G1042121 | NA | non-coding | downstream | 68034 | 15442857 ~ 15443162 (-) |
| G1042116 | NA | non-coding | downstream | 75157 | 15435545 ~ 15436039 (-) |
| G1042115 | NA | non-coding | downstream | 75934 | 15432752 ~ 15435262 (-) |
| G1042167 | NA | non-coding | upstream | 300724 | 15844721 ~ 15865647 (-) |
| G1042386 | NA | non-coding | upstream | 431856 | 15975853 ~ 16004742 (-) |
| G1042409 | NA | non-coding | upstream | 445913 | 15989910 ~ 15994023 (-) |
| G1042425 | NA | non-coding | upstream | 468230 | 16012227 ~ 16012762 (-) |
| G1042426 | NA | non-coding | upstream | 469410 | 16013407 ~ 16013704 (-) |
| G1040432 | LOC106568413 | other | downstream | 1200144 | 14307600 ~ 14311052 (-) |
| G1040300 | NA | other | downstream | 1331055 | 14178658 ~ 14180141 (-) |
| G1039504 | NA | other | downstream | 2155401 | 13355300 ~ 13355795 (-) |
| LOC110536986 | LOC106568381 | other | downstream | 2188480 | 13321118 ~ 13324415 (-) |
| G1039366 | NA | other | downstream | 2358889 | 13151021 ~ 13152307 (-) |
| G1042500 | NA | other | upstream | 560166 | 16104163 ~ 16104883 (-) |
| LOC110537059 | LOC106568318 | other | upstream | 780966 | 16324956 ~ 16328168 (-) |
| LOC110537061 | LOC106568319 | other | upstream | 989620 | 16417638 ~ 16549073 (-) |
| LOC110537077 | LOC106568284 | other | upstream | 1521324 | 17065241 ~ 17068020 (-) |
| G1044482 | NA | other | upstream | 2152132 | 17696129 ~ 17697105 (-) |
