Gene
RNA
| Item | Value |
|---|---|
| gene id | G1042425 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 16012227 ~ 16012762 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1187908 | False | 536 | lncRNA | 0.39 | 1 | 16012227 | 16012762 |
| TU1187907 | True | 295 | lncRNA | 0.42 | 1 | 16012468 | 16012762 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110537052 | LOC106568339 | coding | downstream | 91972 | 15879419 ~ 15920255 (-) |
| LOC110536799 | LOC106568341 | coding | downstream | 155203 | 15806675 ~ 15857024 (-) |
| LOC110537049 | LOC106568342 | coding | downstream | 218396 | 15782631 ~ 15793831 (-) |
| LOC110539118 | NA | coding | downstream | 240476 | 15760264 ~ 15771751 (-) |
| LOC110537048 | LOC106568343 | coding | downstream | 254358 | 15722857 ~ 15757869 (-) |
| mzt2b | LOC106568316 | coding | upstream | 294595 | 16307357 ~ 16312346 (-) |
| ppwd1 | ppwd1 | coding | upstream | 307666 | 16320428 ~ 16324762 (-) |
| LOC110537059 | LOC106568318 | coding | upstream | 312194 | 16324956 ~ 16328168 (-) |
| LOC110537061 | LOC106568319 | coding | upstream | 404876 | 16417638 ~ 16549073 (-) |
| LOC110537062 | csn4 | coding | upstream | 556724 | 16569486 ~ 16576847 (-) |
| G1042386 | NA | non-coding | downstream | 7485 | 15975853 ~ 16004742 (-) |
| G1042409 | NA | non-coding | downstream | 18204 | 15989910 ~ 15994023 (-) |
| G1042167 | NA | non-coding | downstream | 146580 | 15844721 ~ 15865647 (-) |
| G1042179 | NA | non-coding | downstream | 468230 | 15511196 ~ 15543997 (-) |
| G1042175 | NA | non-coding | downstream | 507358 | 15504369 ~ 15504869 (-) |
| G1042426 | NA | non-coding | upstream | 645 | 16013407 ~ 16013704 (-) |
| G1042428 | NA | non-coding | upstream | 4755 | 16017517 ~ 16017749 (-) |
| G1042429 | NA | non-coding | upstream | 5164 | 16017926 ~ 16018160 (-) |
| G1042430 | NA | non-coding | upstream | 5638 | 16018400 ~ 16018666 (-) |
| G1042433 | NA | non-coding | upstream | 16547 | 16029309 ~ 16029665 (-) |
| G1040432 | LOC106568413 | other | downstream | 1701175 | 14307600 ~ 14311052 (-) |
| G1040300 | NA | other | downstream | 1832086 | 14178658 ~ 14180141 (-) |
| G1039504 | NA | other | downstream | 2656432 | 13355300 ~ 13355795 (-) |
| LOC110536986 | LOC106568381 | other | downstream | 2689511 | 13321118 ~ 13324415 (-) |
| G1039366 | NA | other | downstream | 2859920 | 13151021 ~ 13152307 (-) |
| G1042500 | NA | other | upstream | 91401 | 16104163 ~ 16104883 (-) |
| LOC110537077 | LOC106568284 | other | upstream | 1052559 | 17065241 ~ 17068020 (-) |
| G1044482 | NA | other | upstream | 1683367 | 17696129 ~ 17697105 (-) |
