G1042429



Basic Information


Item Value
gene id G1042429
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 16017926 ~ 16018160 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1187914
cagacagagacagagacgtaCGGTGATGTCCAGACAGCTGTCTGAGCCCTCTTCCATGTTGATGTCTGTGCTGTCCAGAGAGGCTGCTTGGTGATCTCCATTAGCCGTCACCACGGGAAGCACCACTTTATGGGAATCAGCACAACAATCAGAAGTCAATTACCAGTCATGTGAGAGTCTGGCCACTGTGTCTGACATCACTAAGACCCTACAGCACAGCTAATCGGGACTGCTA

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1187914 True 235 lncRNA 0.51 1 16017926 16018160

Neighbor


gene id symbol gene type direction distance location
LOC110537052 LOC106568339 coding downstream 97671 15879419 ~ 15920255 (-)
LOC110536799 LOC106568341 coding downstream 160902 15806675 ~ 15857024 (-)
LOC110537049 LOC106568342 coding downstream 224095 15782631 ~ 15793831 (-)
LOC110539118 NA coding downstream 246175 15760264 ~ 15771751 (-)
LOC110537048 LOC106568343 coding downstream 260057 15722857 ~ 15757869 (-)
mzt2b LOC106568316 coding upstream 289197 16307357 ~ 16312346 (-)
ppwd1 ppwd1 coding upstream 302268 16320428 ~ 16324762 (-)
LOC110537059 LOC106568318 coding upstream 306796 16324956 ~ 16328168 (-)
LOC110537061 LOC106568319 coding upstream 399478 16417638 ~ 16549073 (-)
LOC110537062 csn4 coding upstream 551326 16569486 ~ 16576847 (-)
G1042428 NA non-coding downstream 177 16017517 ~ 16017749 (-)
G1042426 NA non-coding downstream 4222 16013407 ~ 16013704 (-)
G1042425 NA non-coding downstream 5164 16012227 ~ 16012762 (-)
G1042386 NA non-coding downstream 13184 15975853 ~ 16004742 (-)
G1042409 NA non-coding downstream 23903 15989910 ~ 15994023 (-)
G1042430 NA non-coding upstream 240 16018400 ~ 16018666 (-)
G1042433 NA non-coding upstream 11149 16029309 ~ 16029665 (-)
G1042436 NA non-coding upstream 15575 16033735 ~ 16034197 (-)
G1042461 NA non-coding upstream 40136 16058296 ~ 16058540 (-)
G1042496 NA non-coding upstream 83883 16102043 ~ 16102253 (-)
G1040432 LOC106568413 other downstream 1706874 14307600 ~ 14311052 (-)
G1040300 NA other downstream 1837785 14178658 ~ 14180141 (-)
G1039504 NA other downstream 2662131 13355300 ~ 13355795 (-)
LOC110536986 LOC106568381 other downstream 2695210 13321118 ~ 13324415 (-)
G1039366 NA other downstream 2865619 13151021 ~ 13152307 (-)
G1042500 NA other upstream 86003 16104163 ~ 16104883 (-)
LOC110537077 LOC106568284 other upstream 1047161 17065241 ~ 17068020 (-)
G1044482 NA other upstream 1677969 17696129 ~ 17697105 (-)

Expression



Co-expression Network