Gene
RNA
| Item | Value |
|---|---|
| gene id | G1042552 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 16166201 ~ 16170494 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1188062 | False | 243 | lncRNA | 0.48 | 2 | 16166201 | 16168737 |
| TU1188063 | True | 243 | lncRNA | 0.48 | 2 | 16166201 | 16170494 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110537052 | LOC106568339 | coding | downstream | 245946 | 15879419 ~ 15920255 (-) |
| LOC110536799 | LOC106568341 | coding | downstream | 309177 | 15806675 ~ 15857024 (-) |
| LOC110537049 | LOC106568342 | coding | downstream | 372370 | 15782631 ~ 15793831 (-) |
| LOC110539118 | NA | coding | downstream | 394450 | 15760264 ~ 15771751 (-) |
| LOC110537048 | LOC106568343 | coding | downstream | 408332 | 15722857 ~ 15757869 (-) |
| mzt2b | LOC106568316 | coding | upstream | 136863 | 16307357 ~ 16312346 (-) |
| ppwd1 | ppwd1 | coding | upstream | 149934 | 16320428 ~ 16324762 (-) |
| LOC110537059 | LOC106568318 | coding | upstream | 154462 | 16324956 ~ 16328168 (-) |
| LOC110537061 | LOC106568319 | coding | upstream | 247144 | 16417638 ~ 16549073 (-) |
| LOC110537062 | csn4 | coding | upstream | 398992 | 16569486 ~ 16576847 (-) |
| G1042540 | NA | non-coding | downstream | 41667 | 16120224 ~ 16124534 (-) |
| G1042496 | NA | non-coding | downstream | 63948 | 16102043 ~ 16102253 (-) |
| G1042461 | NA | non-coding | downstream | 107661 | 16058296 ~ 16058540 (-) |
| G1042436 | NA | non-coding | downstream | 132004 | 16033735 ~ 16034197 (-) |
| G1042433 | NA | non-coding | downstream | 136536 | 16029309 ~ 16029665 (-) |
| G1042558 | NA | non-coding | upstream | 36008 | 16206502 ~ 16209108 (-) |
| G1042657 | NA | non-coding | upstream | 135627 | 16306121 ~ 16306330 (-) |
| G1042646 | NA | non-coding | upstream | 147771 | 16318265 ~ 16320083 (-) |
| G1042665 | NA | non-coding | upstream | 163735 | 16334229 ~ 16334543 (-) |
| G1042670 | NA | non-coding | upstream | 166181 | 16336675 ~ 16337001 (-) |
| G1042500 | NA | other | downstream | 61318 | 16104163 ~ 16104883 (-) |
| G1040432 | LOC106568413 | other | downstream | 1855149 | 14307600 ~ 14311052 (-) |
| G1040300 | NA | other | downstream | 1986060 | 14178658 ~ 14180141 (-) |
| G1039504 | NA | other | downstream | 2810406 | 13355300 ~ 13355795 (-) |
| LOC110536986 | LOC106568381 | other | downstream | 2843485 | 13321118 ~ 13324415 (-) |
| LOC110537077 | LOC106568284 | other | upstream | 894827 | 17065241 ~ 17068020 (-) |
| G1044482 | NA | other | upstream | 1525635 | 17696129 ~ 17697105 (-) |
| G1044649 | LOC106568140 | other | upstream | 1847610 | 18018104 ~ 18018758 (-) |
