G1042753


Basic Information

Item Value
gene id G1042753
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 16413450 ~ 16414495 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1188302
GTGACTATAGGCTGGATCTGATCTGAGCAATATGAACACTAAGACATTCATATCTATATGTTGGTTAATGCTagcaatgttgttgtttgtttaaaaTGATATCTTCTTACCTCACACTGGGAATGTTCATTGATGGTGTAGTACCAACACaccacccctcacctctcacccctTCACATGGTCTTCCCCAGTTGTATCCTGTATTATTCCTAGTGGTGTCAAACATTCTTCTAATATAAACCCTCCACAAGTGACATTGCTTCTGGCGTTGGTTGGGGTTGTGAAAAGGGACCGCCACCTGTGTGGTACTGACCCAGCggaccagacagaccaggcccAGATGCAGCCATGCTGTGGAGGATAAACCAGTAGGACTTGATGGAACCCCCAGACCAAACGGAAATACAATTAAAGAGTCACAAAGGAAACACATGTGGACTGCTAAAATCATAGGACTATGCTACTTGGTAGCCACCCTCAGTTTAACTAAGGACGTTAGACCCGTGATCTTTGGTGATGAAACATTGAACCAGGACATTTGGACATTAGTGGACCATGAAAACTAAAGCATTTCAACTACATTCAACTCAACATGCTGGGTCTTCTTCCAGAGCTGTTCCTTCCTTTCCTTAAATCCTGAGGCTTGAAGTAACCGTCTACTGGCATTGGGACACGGGGCCTACAGACAATGAGACAGATGGACTGACAGAGACACTCTAGAAGACACTCAATCAAACTGGTACTCATAGATGTTATCAATGTCACTGCTTTACCCTGTACCTTCAAGTGcaagagagaatggaaaacaaaaAGCATTATTTGAAGAGTTATGTTTATTTCATATTCAGTATTAATGTTGGTACACTGTTACaattgttttttttgtaaatgatATGCTAATTTATTGCCATGTGTCACTtgttttagatttttgttcactGCATGCAAACAGAACGTTAGTCTAGTGACAAAGAAATACAGTTAAATAGGCCCCTTCACCAAACTGTTTTAATGTAGATATATCAGGTCAATAAAAACAACAGCTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1188302 True 1046 lncRNA 0.41 1 16413450 16414495

Neighbor

gene id symbol gene type direction distance location
LOC110537059 LOC106568318 coding downstream 85282 16324956 ~ 16328168 (-)
ppwd1 ppwd1 coding downstream 88688 16320428 ~ 16324762 (-)
mzt2b LOC106568316 coding downstream 101104 16307357 ~ 16312346 (-)
LOC110537052 LOC106568339 coding downstream 493195 15879419 ~ 15920255 (-)
LOC110536799 LOC106568341 coding downstream 556426 15806675 ~ 15857024 (-)
LOC110537061 LOC106568319 coding upstream 3143 16417638 ~ 16549073 (-)
LOC110537062 csn4 coding upstream 154991 16569486 ~ 16576847 (-)
LOC110537069 LOC106568328 coding upstream 201872 16616367 ~ 16630120 (-)
LOC100305243 LOC106562364 coding upstream 222995 16634735 ~ 16638951 (-)
LOC110537074 LOC106562412 coding upstream 525932 16940427 ~ 17041905 (-)
G1042745 NA non-coding downstream 9758 16403461 ~ 16403692 (-)
G1042722 NA non-coding downstream 34087 16379161 ~ 16379363 (-)
G1042704 NA non-coding downstream 49853 16363329 ~ 16363597 (-)
G1042670 NA non-coding downstream 76449 16336675 ~ 16337001 (-)
G1042665 NA non-coding downstream 78907 16334229 ~ 16334543 (-)
G1042754 NA non-coding upstream 1710 16416205 ~ 16416466 (-)
G1042955 NA non-coding upstream 74428 16488923 ~ 16490600 (-)
G1043015 NA non-coding upstream 183219 16597714 ~ 16598284 (-)
G1043017 NA non-coding upstream 183963 16598458 ~ 16598766 (-)
G1043022 LOC100380853 non-coding upstream 189717 16604212 ~ 16604439 (-)
G1042500 NA other downstream 308567 16104163 ~ 16104883 (-)
G1040432 LOC106568413 other downstream 2102398 14307600 ~ 14311052 (-)
G1040300 NA other downstream 2233309 14178658 ~ 14180141 (-)
G1039504 NA other downstream 3057655 13355300 ~ 13355795 (-)
LOC110537077 LOC106568284 other upstream 650826 17065241 ~ 17068020 (-)
G1044482 NA other upstream 1281634 17696129 ~ 17697105 (-)
G1044649 LOC106568140 other upstream 1603609 18018104 ~ 18018758 (-)
G1044671 NA other upstream 1641616 18056111 ~ 18058392 (-)

Expression


Co-expression Network